Etheostoma cragini (Arkansas darter): 117942006
Help
Entry
117942006 CDS
T07493
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117942006 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117942006 (exosc5)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117942006 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117942006
NCBI-ProteinID:
XP_034723175
LinkDB
All DBs
Position
3:complement(9577280..9585122)
Genome browser
AA seq
249 aa
AA seq
DB search
MSSVRALHSKIDCVTHQRQTNPAAHSSGSMMEVCGSSSVSLREFGSEQSLLSRPDGSASF
IQGDTSVLAAAYGPAEVKVSKEIYDRATLEVLIQPKVGLPSIRERAQEQCVRETCEASLL
LSLHPRSSLTLILQLIHDDGSLLSCFLNAACVALMDAGLPMSCLFCGVTCAIDADGHIIT
DPTAAQEKESRALMTFAIDSKQHRVMMSSTRGSFSVHELQQCIAVSQKASEKIFQFYRDS
VRRRYSKTL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagtaagggccctacatagcaaaatagattgcgtcactcaccagcgacaaact
aatcctgcagcgcacagtagcggcagcatgatggaagtgtgcggctcttcaagtgtcagt
ctgagagagtttggcagtgagcagagcctcctgtcccgacctgacggttcagcttccttc
attcaaggagacacaagtgtgctggctgcagcatacggaccagccgaggtcaaagtcagt
aaggaaatctatgaccgggcaaccctggaggtgttgatacagcccaaagtgggactgccc
agcataagggagcgagcgcaagagcaatgtgtgcgagaaacctgtgaggcgtctctgctc
ttgtcccttcaccctcgctcctccctcactctcattcttcagctgatacatgatgacggc
tcactcttgtcctgctttttgaacgccgcctgtgtggctctgatggacgcaggcctgccc
atgagttgcctgttctgcggggtgacctgtgccatcgacgcagacggtcacatcatcaca
gaccccaccgcagctcaggaaaaggaaagtcgagctttgatgacctttgctattgactct
aaacaacacagagtaatgatgtcatcaaccagaggatcgttttctgtccacgagctgcag
cagtgtatagccgtcagtcagaaagcatcagagaagatcttccagttctacagagactca
gtccgccggcggtactccaaaaccctctga
DBGET
integrated database retrieval system
