Etheostoma cragini (Arkansas darter): 117942030
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Entry
117942030 CDS
T07493
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117942030 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
117942030
NCBI-ProteinID:
XP_034723205
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Position
3:18098418..18107546
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AA seq
902 aa
AA seq
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MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNYLF
RSVSLTHLDLRGNRLKTLPYKGTLEYVGRSLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGEITCEYPFHLHGKDLREIKRKELCPLLSDAEIEAKLGIPRVPFSNENTWPTKPSSM
LSSVHNTASSVEYKERVVKPTKRPRPTKNPPTPRSIYPGINQPPVAGYQTRPPIPIICPA
GCTCNLHINDLGLTVNCKEKGFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLTPGMFRGLQMLSYLYFEYNVIREI
QPNSFSLMPNLQLVFLSDNLLRSLPNEAFAGTNLARLNLRNNYFLSLPVRGVLEHLTSIV
QIDLHQNPWDCSCDIIPLKQWLEKLSSVIVVGDVICKTPEFAFGKDLRSLEVEVICPELK
YSSGPSPARPGGDDLTTGSSDMGEAGGRGAVPLSVLILSLLILFISAVFVAAGLFAFVLR
RRKNLPFRKRSEVDLTGIQMQCRIFEDPPRQSSAGNTGTPEKTTPSMNTHTSHTHAHGHV
YDYIPHPVTQMCNNPIYKPREGEIAAEDRVQFSEKKENGSCSNSNYRTLLEKDREWTLAV
SNSQLNTIVTVNHSTAEMAGFHENGGLCPTVIDSQRPTPTVGFVDCLYGTVPKLKDMHVA
HAHPPGMQYPDLQQDARLKETLLFTTGKGCYPESSQSDYLELRAKLQTKPDYLEVLEKSY
RF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccgatcccacta
ctagaggactccgaggagatcgacgagccctgcttcgagccctgctactgcgaggtcaaa
gaaggcatctttcacgtccactgtgacagtaaaggatttacaaatgtcagccagatctcc
cagatatggagccggccctttaagctcaacctgcagagaaattccatgagaaagctttac
tttaacagcttcctccatctcaacaatgccatatctattaatctgggtaataacgctttg
caagatatccatgccggggcgttcaatggcttaggaatactcaaacggctgttcctacat
gaaaacaaactagacgttttccgtaatgacacttttctggggttagagagtttagagtat
ctccaggcggactacaatgtcatcaaacggattgaaagtggtgcattcaggcaccttcac
aaactaagagtgctcatactaaatgacaatttgatccctgtgctcccaaattatcttttc
cggtctgtgtcactcacacatctagacctgagaggaaacagactaaagacattgccgtat
aagggtacactggagtacgttgggaggagcctaatggaaatccagctggaggagaacccc
tggaactgtgtgtgtgagattgtccagttaaaaacatggctagagagaatcccttataca
gctttggttggtgagatcacatgtgagtacccattccacttacatgggaaagacttacgg
gaaataaagcgcaaggagctctgtccactgctctccgatgcagagattgaggccaagctt
ggaattccccgggtcccattcagcaatgagaacacatggcctactaaaccttcctccatg
ctctcctccgttcacaacacagcctcttctgtggaatacaaggaaagagttgtcaagcct
accaaacgacctcggcccacaaagaaccccccaacccctcgtagcatctacccaggcatc
aaccagccccctgttgctggctaccaaacaaggcctcccatcccaataatttgtccagct
ggatgtacttgcaaccttcacatcaatgaccttggtctaacagtgaactgtaaagagaaa
ggctttcacaacatctctgaactcctgcctcggcccctcaatgccaagaaattatatctc
agtgggaacttaatacagaaaatctatcgttctgatttctggaacttctcaagtttggat
ttactgcatttaggaaataatcggatatcctacgtccaagagggggcctttatcaacctg
ccaaacttaaaaagtttatatctgaatgggaatgacattgaaagactcacccctgggatg
tttcgggggcttcagatgttgagttatctttattttgagtataatgtcatacgcgaaatt
caaccaaactccttctccttaatgccaaacctccagttggttttcctgagtgacaacctg
ttacgctccctccccaatgaagcttttgctggcaccaacctggcacgcctcaacctccgc
aacaactacttcctatccctgcctgtgcgtggcgttctggagcatctgacctctattgtt
cagattgatctacaccagaacccctgggactgctcctgtgatattatccccctaaaacag
tggctggaaaagctctcctctgtcattgtggttggagatgtcatctgcaagacaccagag
tttgcttttgggaaggacctgcgttcactggaggttgaggtcatctgtcctgagcttaag
tattcttcaggaccctcacctgcccggcctggtggggacgaccttaccacggggagctct
gacatgggggaggccggtggaagaggggctgtcccactgtctgtcctcatcctcagtcta
ctgatcctcttcatctctgctgtgtttgtggctgccgggcttttcgcctttgttcttcgt
cgcaggaagaatctaccctttcgcaaacgttctgaggtagatctgacagggatccaaatg
caatgcaggatttttgaggacccaccaaggcagagtagtgccggtaacactggcacacca
gagaaaacgacacccagtatgaacactcacactagtcacacacatgctcatggtcacgtt
tatgattacatcccccaccctgtgactcagatgtgtaataaccccatctataagcctaga
gagggggagatagcagcagaagacagagtgcagttttcagagaagaaagaaaatggcagc
tgtagcaacagtaactacagaaccttgttagagaaagacagagagtggactctggctgtc
tcaaactctcaacttaacactatcgtcacagtcaaccactccacagctgaaatggcagga
tttcatgagaatggagggctctgccctacagtaattgacagtcagaggcctacgccaaca
gtgggctttgtagactgtttgtatgggacagtacccaaactaaaggacatgcacgtggcg
catgcgcacccaccaggcatgcagtacccggatttgcagcaggatgcacggctgaaggag
acattgcttttcacgacggggaaaggctgctaccccgaatcgtcccaaagcgattacctt
gagttaagggccaaacttcaaaccaagccggattacctcgaagtcttggaaaaatcatac
cgattttaa
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