Etheostoma cragini (Arkansas darter): 117942038
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Entry
117942038 CDS
T07493
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X1
KO
K03869
cullin 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117942038 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117942038 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117942038 (cul3b)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117942038 (cul3b)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
117942038 (cul3b)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117942038 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
117942038
NCBI-ProteinID:
XP_034723213
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Position
3:16904814..16920351
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AA seq
767 aa
AA seq
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MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNRDKSIFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggcggcaccaagaaggacaccaaaatgaggatacgggccttt
cctatgacgatggacgagaagtacgtcaacaatatctgggaccttctgaaaaatgccatc
caggagattcagaggaagaacaacagtggcctaagctttgaggaactgtacaggaacgcg
tacacaatggtgctccacaaacatggagagaagctgtacacaggtctgcgggaggtcgtc
actgaacaccttatcaacaaagtacgagaagatgtcctcaattccctaaacaataacttc
cttcaaacactaaatcaggcctggaatgaccatcaaacagctatggtgatgatcagagac
atccttatgtatatggatcgggtgtatgtacagcagaacaatgtagaaaatgtctacaac
ctgggtctcattatctttagggatcaagtggttcgttatggctgcatcagagaccacctc
cgacagaccctgctggacatgatcgcacgtgagaggaaaggggaggtggtggacaggggg
gccattagaaatgcctgccaaatgttaatgatcctcggccttgaagggagatctgtttat
gaagaagactttgaggcaccgttcttagaaatgtctgcagaatttttccagatggagagc
caaaagttccttgcagaaaacagtgccagtgtatacataaagaaggtggaagccagaatc
aatgaggagattgagcgggtgatgcactgcttggataaatctacagaagagcctattgtc
aaggtggtggaacgggagctcatctccaaacacatgaagacaattgtagagatggaaaac
tctggcctggtccacatgctcaaaaatgggaaaacagatgatttggcgtgcatgtacaag
ctgttcagcagggttcccaatgggctgaagacgatgtgtgagtgtatgagctcatacctg
cgggagcaaggaaaggctcttgtgtctgaggagggagagggaaagaaccccgtagactac
atccagggtttgctggacctgaagtcacgttttgaccggtttctccaggagtcctttaac
aatgaccggctcttcaaacaaactattgcaggcgattttgagtacttccttaaccttaac
tctcgctcgcctgagtacctctcactctttattgacgacaaactgaagaaaggagtaaaa
gggttgacagagcaagaggtggagtctatactggacaaggccatggtgctgttccgcttc
atgcaggagaaggacgtgtttgagaggtactacaagcagcatctcgcccgcaggctgctc
accaacaagagtgtctctgatgactctgagaagaacatgatctcaaagctcaagaccgag
tgtggctgtcagttcacctctaaactagagggcatgttccgggatatgagcatctccaac
accaccatggatgagtttagacaacatctacagacaactggggtctcacttggaggagtt
gatctcactgtgagagtcctgaccacgggatactggccaacacaatcagcaacacccaag
tgcaacatccccccttcaccgcgacatgcatttgaagtctttagaaggttttatcttgga
aaacacagcggcagacaactcacactgcagcaccatatgggctcggcagatctaaacgcc
actttctacggtccaatcaaaaaggaggatgggtcagaggtcggagtggggggagctcag
gttaccggctcaaacaccaggaagcacatcctgcaggtctccaccttccagatgaccatc
ctcatgcttttcaacaacagagacaagtccatatttgaggagatccagcaggagacagac
attccagagcgggagctggtgcgagcgctgcagtctctggcctgtgggaagcccactcag
agagttctcaccaaggagcccaagtccaaggagatcgagaatggccatgtgtttacagtc
aatgatcagtttacctccaaactccaccgtgtcaagatccagacagtggctgcgaaacaa
ggggagtcagacccggagaggaaggagacgcgacagaaagtggacgacgacagaaagcat
gagatcgaagcagccatcgttcgcattatgaagtccagaaagaagatgcagcacaatgtt
ctagtagcagaggtgacgcagcagttacgagcacgattcctccctagtcctgtagtcatt
aagaagcgcattgaaggactcattgagagggaatatttggcacgaacaccggaagaccgc
aaagtgtacacttacgtagcataa
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