Etheostoma cragini (Arkansas darter): 117942073
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Entry
117942073 CDS
T07493
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117942073 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117942073 (rabgef1l)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117942073 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
117942073 (rabgef1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Motif
Other DBs
NCBI-GeneID:
117942073
NCBI-ProteinID:
XP_034723272
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All DBs
Position
3:complement(11237691..11244517)
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AA seq
504 aa
AA seq
DB search
MTSQRRGIHLDQSELLCKKGCGFYGNTGWQGLCSKCWREENQREKQKQIQEDWALAERLQ
REEEEAYSRHQKAQSQPTITPFSKFEERKTKEKSSKVHTVTKFFTPSTKTPPKKDTPFDT
HSSPSPSSSTSRHSSVDSDYATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMGADEL
SECVQDFYQNLSDRLHTQFKGSSDHVESVMDEVEKYMMTRLYKDVFCPETTDDERKDLAI
QKRIRALHWVTIEMLCVPVDEEIAEVSDSVVKAITDVIEMDSKCVPKEKLACITRCSKHI
FNAIKISKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFSNPSRLMTGEDGYYFTN
LCCAVAFIEKLDGQSLNLSSEEFDLYMSGQASPHWPQSTGASSCSPGSAALSQVHKRLDV
LTGLGERQERVMEKARQLESDLIDWTDEVEQKVQSVLESFPAETQNPTETTASGTAPAAS
SAIDSENVENEHLPPPLQPQVFAG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccagcgccgtgggatccatctggaccaatcagagctgctttgcaaaaaagga
tgtggtttttatggcaacactggctggcagggcctgtgctcaaagtgctggcgagaggaa
aatcaaagagaaaagcaaaaacagattcaggaagactgggcactcgcggaaagactgcag
agagaggaagaggaagcatatagcagacatcagaaggcccaatcacagcctaccatcaca
cccttcagcaagttcgaagaaagaaaaactaaggaaaagtccagcaaagtccatacagtt
acaaagttttttactccttccacaaaaacaccaccaaaaaaagacactccttttgacact
cactccagcccaagtcccagctcctctacaagccggcactcttctgtagacagtgactat
gcaacgcgggagttcattgattttctcaagccgctgaagtccggcagggagatcttcaaa
cagtgccgggccttcactgagagcatggtctataagcgggacatgggggctgatgagctg
tcagagtgtgtgcaggacttctaccagaacctctcagaccgcctccacacccagttcaag
ggttcatcagatcacgtggagagtgttatggatgaagtcgagaagtacatgatgactcgt
ctctacaaggatgtcttctgtcctgagaccacagacgatgagaggaaagacctggccatt
cagaagagaatcagagccttgcattgggtcactattgagatgctgtgcgttcctgtagac
gaggagattgctgaggtgtcggacagcgtagtcaaagccatcacggatgtgattgaaatg
gattcaaagtgtgtgcccaaggagaagctggcatgcatcacccgttgcagcaagcacatc
ttcaacgccatcaaaatcagcaagaaagaggctgcgtctgcagatgacttcctccccacg
ctcatctacattgtgctgaaagcaaacccaccgcgactgcagtccaacatccagtacatc
acccggttcagcaaccccagcagactgatgactggagaggatggttactacttcactaat
ctgtgctgtgcggtggccttcattgagaagctggacggccagtctctgaacctgagctct
gaggagtttgacctgtacatgtcgggccaggcatccccccactggccacagtccactgga
gcctcttcctgctccccaggcagcgccgctctcagtcaggtccacaaacgtctggatgtg
cttacagggctcggggaaaggcaggagagggtcatggagaaggctcgccagttggagagc
gacctcatcgactggacagacgaagtggagcagaaggtgcagagcgttctggagagcttt
ccagcagagacacaaaaccctactgaaaccacggctagcgggacagctcctgcagcatca
tcagccatcgactctgagaatgttgagaatgagcacctgcccccaccactgcaaccgcaa
gtgtttgctggctga
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