Etheostoma cragini (Arkansas darter): 117942216
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Entry
117942216 CDS
T07493
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117942216 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117942216 (bicra)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
117942216 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
117942216
NCBI-ProteinID:
XP_034723460
LinkDB
All DBs
Position
3:complement(9615203..9630182)
Genome browser
AA seq
1890 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGSSDPSSSFFSTTGGHVPEVQPA
VQLSANEPAGLPRVSVDLDFLEDDDILGGSPGGESGSNGIGTNHEPCDILQQSLAEANIT
EQSLQEAEAELDLGSFGIPGLTQVVQTLPDASLSGAGGTAVGVGMGVGGAAAAIFPGSGP
STTATPPNAAADMLGSVLAQQGLQLQSQVMNKAISVQPFMQPVGLGNVTLQPISSLQALP
NGSQSGHLGIGQIQVVGQPTVMTINQSGQPILAKAMGGYQLHQSGQDVSGAGSQAGLGGS
GGGLLIQGNKATLGSPALNGPAVCVSSTNSSGTMTPAGLVGFGSTTLSSGIGHQTQNQGQ
IMQNVIIQRTPTPIQPKPPQGGAIQPKLFKQQQQQQQQQSQPGPQTLQNDAHKALGLQQI
PVSAAQNVTFLTGKPGSNVVLSTQASTQGPQFQQTLFKQQAPQPSGKPLSVHLLNQQGIV
IPSQTVLQGQNHQFLLPQLQAGGQILTQHPGGHIITSQGPGGQLIANQILTSNQNINLGQ
VLASQGHPGAAHILSGSIQLQPGQMGTPTLFQMPVSLAQSQSQTQTHTVSGHAQTVIQGM
PIQNSLTMLSQVEGLSPAVSLQPALQPQPGGVPSSTGAATMAQGQPGECVTVLGSSTDQA
AHPTQQHAPQSSILAMQTASCVSTATTVTSSSQSMSVPTSSSVTAVGLVPHQAQHSPGRL
LFTNQGSSMILSQESLQMFLQQEQHHQTENESTPSAGVPASVIVSSNSVTAPAPSVHDSQ
LTDSWVGLSHSPSPGPSHMAAVVKQVPSSGHQQSLIQGMSPSPALSTHSSAPPVAVSPQP
SHSPLTLSQHIQSPHHQQQSRPPSQPQPQSQTPSRSCTPSSHPQLFIVHNQMAESPQPAP
QGQQQHTQPQHAHIQVQLQLQPQPRPASQPAPYQQDMPPLSQSPKPPPPPAPPAPHQFTA
PPVSTSAAAVVKAQVPIPGLTAEHQHHLQLVAAQIQTLSAISQPSPQQKQLLDKLHQVQQ
SIVLQAKQAAQPQAAGPFSSQQDVPVDKVAVASSASAGLPAQLPSVLQQMSVLVKTPAPA
SSDLQVFSGAQGPAGAMGNQTVTPSSLNQPAQVQPKPGVISSVGGMTLGKGGMQIQVLGT
SLTQMPAPQLPAPLQTQTTTMKMPFSAEPSKEARMLEQLRKQQGSVLHPNYSAPFYSFED
TMHRLLPYHLYQGTANSSQDYQKVDDEFETVSCHLLKRTQAMLDKYRHLLFAESKAFKPE
QRLGPSAEMVMIDRMFIQEEKIALSQDRILAKERPEEFVANARMLESVVSSQQKAPSAEP
TSASGGVAAAVPAPAPAAPVPVPLSNLAPNPPPAPTPSPSPASAPVPAPASAPAPPAAPT
ATPFPPTKLVIKHGGGGASVSWSSGGPPPPAAVGRLAEPAAQSSSFSRASAASPDDDDAL
PQRTSKPPMKTYEARRRIGLKLKIKQDQTGFSKVVHNTALDPVHTPQPQQSGQSTSQPQT
QPQGQAAVLHPKPRPLSTPPPTVIRTQSPICTASSASLVTTATSQSNPPLRGTVPPNAAP
ASSSSTSTSHTWSLSSSASSTQVNGSLDHHDGGGLKHNSASTATPSQTTCRLPLRKTYRE
NISPRVRPGVPGGGDESLSYPRPTPSPPQHDASSPPSERTVIASVKVEKRGRDALHSHTE
SSHETGRLRSAMQGLDEMDEVFSRGIKTTQHHHHPQLPDREGAKERGEEQTDQETDVSKY
KRASGKNRHRAGGTFRMDQHAPGPPSPESSFTRDSLLPAKRCKSDSPDMDNASFSSGSPP
DDSLNEHLQCAIDSILNLQQEPSARGHHIKGGHSRSQQHQSQRPGGLAASSHRPSVPPTS
SASASSSLAQHPQVGGRGHNGSLVSQTQSR
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagacggcaggtgccttctagatgtaatttgtgacccagaagctctcaat
gactttcttcatggatctgagacccatttggacactgacgacctattggatggttcgagt
gacccctccagctcgttcttctctaccactgggggccatgttccagaggtccagcctgca
gtccagctgtcggccaatgagccggccggcctacccagagtcagtgttgacctggacttc
ctggaggatgatgacatcctgggaggatccccaggtggtgaaagtgggagcaatggcatt
gggacaaatcacgagccatgcgacatcctgcagcagagcttggctgaagcaaacatcaca
gagcaaagcttacaggaggcagaggctgagctggacctgggctcctttggaattccaggc
cttacgcaggtggtacagacactgcctgatgccagcctctctggggctggaggcactgct
gttggtgtaggcatgggtgttgggggagcagcagcagcaattttccctgggtcaggcccg
agcaccactgctactcctcccaatgctgcagctgacatgctggggtcagtgcttgctcag
cagggccttcaactccaatcccaggtcatgaacaaggccattagtgttcagccgtttatg
cagcccgtcggcctgggaaatgtgacacttcagcccatttcaagtctccaagctcttcct
aatgggagtcagtctggacatttgggtatcggacagattcaggttgtgggtcaacctaca
gtcatgactatcaatcagtctgggcagccaatcctagctaaggccatgggtggataccag
ctgcatcagtctgggcaagatgtatcaggtgctggttctcaggcagggcttggaggctca
gggggtggacttctgatccaaggtaacaaagccactttgggatctccagctttaaacgga
ccggctgtttgtgtcagcagcacaaacagcagcggcacaatgacccctgctgggctcgtg
ggctttggcagcaccactctaagttcaggaattggacaccagacgcaaaaccaaggccaa
atcatgcagaacgtgatcatccagcgcacaccaacacccattcagcctaaaccccctcag
gggggagccatccaaccgaaacttttcaaacagcaacaacagcagcagcagcagcagtca
cagccaggaccccaaacgctgcagaacgatgcccacaaggctctagggctgcagcaaatt
ccagtttctgctgctcagaatgtaaccttcctgacaggaaagcctggttctaacgttgtc
ctgagtactcaggcctcaacacaaggccctcagtttcaacaaaccctattcaagcaacaa
gcaccacaaccatcgggcaagcctcttagtgtacacttgttaaaccaacagggcatcgtt
attccctctcagacagttctgcaaggtcagaaccaccagtttctcctaccacaactacaa
gcaggtgggcagatcctgacccagcaccctggggggcacattataacaagtcagggtcct
ggtggacagctcattgcaaaccagattttaacttcaaaccagaacatcaacctgggccag
gtgttggcttcacagggccaccccggggcagcccacatcctctctggatctatccagctc
cagcctggccagatgggcacgcccacgctctttcaaatgcccgtctcgttggcccagagt
caaagccagacacagacccacactgtctcaggtcatgcccagacagtcatacagggcatg
cccatccagaactccctgaccatgctcagtcaggtggaggggctgagccccgcagtcagc
cttcagccagccctgcagcctcagccaggcggagtccccagcagcacaggtgcagcgacc
atggctcagggccagcccggagagtgtgttactgttctgggtagctccacggaccaggct
gctcatcccactcagcagcatgcaccacagtcctctatcctcgccatgcaaacggcatcc
tgtgtgtccacggctactacagtaacctcctcttctcagtccatgtctgtgcccacctcg
tcctctgtcacagcagtggggctggtcccccatcaggctcaacatagtccagggaggtta
ctgttcaccaaccagggctccagtatgatcctgagccaagagtctctgcagatgttcctg
caacaggagcagcaccaccaaacagagaatgagtccaccccctctgctggcgttccagcg
tctgtaatcgtcagcagcaacagcgtcactgctccggccccctctgtccatgacagccaa
ttaactgactcttgggtgggtctgagccacagcccttcccctggcccctcccacatggca
gcagtggtaaagcaggtgccctccagtggacatcagcagtccctaatccagggcatgtcc
ccctccccggccttgtccactcactcctcggcgcccccagtggcggtcagcccgcagcct
tcccactctcctctcactctgagccagcacatccagtcaccgcaccatcagcagcagtcg
cgtcctccctcccagccgcagccacagtcccaaacgccctcccgctcatgcaccccctcc
tctcacccccagctctttattgtccacaaccagatggcggaatccccccagccggctccg
cagggccagcagcagcacacacagccccagcacgcacacattcaggttcagctgcagctg
cagcctcagccgcggccggcctctcagcccgccccttatcaacaagatatgcctccgctg
tcccagtcgcccaagcccccccctcctcctgcgccgcccgcaccacaccagttcaccgct
cctcctgtcagcacttctgccgctgctgtggtcaaagcccaggttccaatcccgggcctg
acagcagagcaccagcaccacctgcaactagtcgctgcacagattcagacgctgtcggcc
atcagccagccctcgcctcagcagaaacagctgctggacaagctacaccaggtgcagcag
agcatcgtgctgcaggccaagcaggctgctcagcctcaagccgccggtccgttcagctcc
cagcaagacgtgcctgttgataaagtggcggttgcatcatcggccagcgctggtctgcct
gctcagcttccctcggtgctgcagcagatgtcggtgctcgtcaaaacaccggctccagca
tcaagtgacttacaggtattctcaggagcccaagggccagctggagcaatggggaatcag
actgtcactccttccagccttaaccagcctgcacaggttcagccaaagccaggggtgatc
agctcagtgggagggatgactctggggaaaggtgggatgcagatacaggtgttaggtact
agtcttactcaaatgcctgctccacagctcccagctccactacaaactcagacaacaaca
atgaagatgcctttcagtgcagagcccagcaaagaagccaggatgctggaacagctgagg
aaacagcagggttcagtgcttcacccaaactacagtgcccctttttactcctttgaggac
acaatgcacagactgctgccttaccatctctaccagggaactgccaactcttctcaagat
tatcagaaagtggatgatgaatttgagacggtctcctgccatctgctgaaaaggacccag
gcgatgctggataagtatcgccacctgctctttgctgagtcaaaagcgtttaaacccgag
cagagactgggcccctcggcagagatggtgatgattgaccggatgttcattcaggaagag
aagattgcgttgagccaggacaggattttggccaaggagagaccagaggagtttgtggca
aacgcccgcatgttggagagtgtagtttcatcccaacagaaagcaccttctgctgagccc
acatcagcgagtggaggcgtagccgctgctgtccctgctccagcgcctgcggctccggtc
ccagtccctctctcaaacctcgccccaaaccctcctcctgctcccaccccgtctccatct
cctgcttccgctccagtccctgctcctgcttcagctccagcacctcctgccgcccccacc
gccacccctttcccccctaccaaactggtcatcaagcatggcggaggcggagcctctgtg
tcctggtccagcggcggtcccccacctccagctgcagtgggcaggctggccgaacccgcc
gcccagagctcctccttcagtcgcgcttcggcagcatcgcccgacgacgatgatgccctc
ccgcagagaaccagcaaaccgcctatgaagacctacgaggctcgcaggagaataggcttg
aagctgaagatcaagcaggaccagacagggttcagcaaggtggtccacaacactgcctta
gaccctgtgcacacacctcagccccagcagagcggccagtctacatcccagcctcagact
cagccccagggccaagctgctgtactgcacccaaagccccgcccactgtcaacgccccct
cccacagtaattagaactcagtctcccatatgcactgcttcctctgcctcattggtcacc
acagcaacctctcagtctaacccgccactgagaggtactgttccccccaacgcagcccca
gcttcctcttcctctacctctacctcccacacttggtcgttgtcctcctccgcctcttcc
actcaagtgaacgggtcgttggatcaccacgacgggggtgggctcaaacacaattctgcc
tccactgccacgccctcgcagacaacatgccgtctcccccttaggaaaacctaccgggaa
aacattagtccccgggtcagacccggtgttccagggggaggagacgaaagtttgtcctac
ccgagacccacgccatcacccccccagcacgatgcctcctcccccccctcagagcggaca
gttatagccagtgtgaaggtggagaaacgaggccgagatgccttgcatagccacacagag
tcgagccacgaaacgggccgtttaaggagtgcaatgcagggactggacgagatggacgag
gtgttcagccgtggaatcaaaaccacacagcaccaccatcacccacagctccccgaccgg
gagggggccaaggagagaggggaggagcaaacagaccaagagacagatgtaagtaaatac
aagagggcaagtgggaaaaacagacatagggccggcgggacgttcagaatggaccagcat
gcccctgggcctccctccccagagtcctccttcacgcgagactctttgcttcctgccaaa
cgctgcaagtcagactcccctgacatggacaacgccagcttctccagcggcagccccccg
gacgactctctgaacgagcacctgcagtgtgccatcgacagcatcctgaacctgcagcag
gaaccctccgcccgcggccaccacattaaagggggccacagcaggtcccagcaacaccaa
agccagcgccccgggggcttggcagcctcatcccacagaccctcagtaccacccacctct
tctgcctccgcatcgtcctccctggcccagcaccctcaggtcggtggccgtggccacaat
ggcagcctggtgtcccagactcaaagcagataa
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