Etheostoma cragini (Arkansas darter): 117942226
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Entry
117942226 CDS
T07493
Name
(RefSeq) CD166 antigen homolog A-like isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117942226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117942226
04090 CD molecules [BR:
ecra04090
]
117942226
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
ALCAM
117942226
CD molecules [BR:
ecra04090
]
Proteins
117942226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
C2-set_2
ig
V-set
Syndecan
Ig_4
DUF6377
Protocadherin
TMEM154
DUF6773
KIAA1549
PAP_PilO
Motif
Other DBs
NCBI-GeneID:
117942226
NCBI-ProteinID:
XP_034723478
LinkDB
All DBs
Position
3:complement(2088832..2126587)
Genome browser
AA seq
569 aa
AA seq
DB search
MHLLSASCVCALLITALLRQVSGLETFIGMYGETLEIPCNNGAMKTEDILLTKWKYDKGE
GLSGDLLVKQKYQDVIISATDEYEGRVSMAANSSLLLTAASLTDQRTFTCMVVAGADITE
YPVNVVIYKAPSGLEISDNAQELEIGKLTKLGKCVAKDANPAANITWLKNNTPLMADGKG
ISIKASVLVDPATGLSSTISILEYSAKKEDTDAEFTCSTQHTVGAELVSSPVTLTITYTT
ENLVLQVIAQDPLIEGDNVTLKCVADGNPAPTAFMFHLKEELVKVENVNTYTITNVSRDT
TGEYKCSLVDNPTLEASKDITVNYLDINLIPSGNIVKSAGEAMDVTLQIDSSGDYKVSWT
KDNVKLDKEPKFAKLTYADSGVYECEVTNGALSLKASLELAVQGAPVIKQLSKLRGEDGT
HKVLICEVEGSPKPAVSWSINGTSLDESPFLNGKIKHKITVVPTANLTVSCTVSNEFGVD
SRTINVSSLIEEVRMDKQDQSDDNDQTKLVVGVVVGLLVATIVIGLAYWVYMKKSKQGSW
KTGEKENGSSEEEKKLEEKVEENSQKAEV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgttgtccgccagctgcgtgtgcgccctcctcatcaccgcgctcctgcgccaa
gtcagcggtttggagacttttatcggcatgtatggggaaacactcgagatcccgtgcaac
aatggagccatgaaaacagaggacatcctgctcactaagtggaaatatgacaaaggagag
ggactttctggggatttactggtcaagcagaaataccaggatgtcataatcagcgccact
gatgagtatgagggccgcgtgagcatggctgcaaactccagcctgcttctcactgcagcc
agtctgactgaccagcgcacgttcacctgcatggtggtggctggcgcagacattacagaa
tacccggttaacgttgtgatctacaaggcgccgtcaggcctggagatttctgacaacgca
caggaactagagattggcaaacttactaagctcggaaaatgcgttgcaaaagacgccaat
ccagctgcaaatatcacgtggctgaagaacaacacaccacttatggcggacggaaaaggg
atttccatcaaagcctcagtgctggtggaccctgccactggcctttcatccactatctca
atcttggagtactcggccaagaaggaagacacggacgctgagttcacctgcagcactcag
cacaccgtgggcgccgagctggtgtcctctccagtcaccctgactatcacctacaccaca
gagaacctcgtccttcaggtcattgctcaggaccctctgatagaaggagacaatgtgaca
ctgaagtgtgtggcagatggtaaccccgcccctactgcctttatgttccaccttaaggaa
gagttggtgaaggtggaaaacgtgaatacttacaccatcacgaatgtctcacgggacacc
actggtgaatacaaatgttctcttgttgacaacccaacattggaagcgtctaaggacatc
acagtcaactacctagacatcaatttaatcccctctggaaatatcgttaagagtgctggt
gaggccatggatgtaactctccagattgattcctccggagactacaaggtctcctggaca
aaggacaatgttaaactggacaaagagcccaaatttgccaagctgacttacgctgactct
ggcgtctatgaatgtgaggtgacgaatggggccctcagccttaaagcttcccttgagctg
gctgtccaaggtgctccagttatcaagcagctgtccaaactgcgcggtgaagacggcaca
cataaagtcctgatttgtgaggtagaaggttctccaaagccagctgtttcctggagcatc
aacggcacctcgcttgatgagagtcccttcctcaacgggaagataaaacacaagatcaca
gttgtgcctactgcaaatctgactgtctcttgtacggtgtccaatgagtttggcgtggat
agcagaactataaatgtgtcatccctaattgaggaggtgagaatggataaacaagaccaa
tcggatgataatgaccaaaccaagttggtggttggagttgtagtcggtctcctcgtcgcc
actattgttataggcctggcatactgggtctacatgaagaagtccaagcaaggaagctgg
aagactggtgaaaaggagaacgggtcttctgaggaagagaaaaaactggaggagaaagtg
gaggagaacagccaaaaagctgaggtgtaa
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