KEGG   Etheostoma cragini (Arkansas darter): 117942266
Entry
117942266         CDS       T07493                                 
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ecra04515]
    117942266 (lrfn1)
   04990 Domain-containing proteins not elsewhere classified [BR:ecra04990]
    117942266 (lrfn1)
Cell adhesion molecules [BR:ecra04515]
 Immunoglobulin superfamily
  SALM family
   117942266 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:ecra04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   117942266 (lrfn1)
SSDB
Motif
Pfam: LRR_8 Ig_3 I-set LRR_4 LRR_5 Ig_2 fn3 ig LRR_9 Ig_DSCAM-DSCAML_C C2-set_3 Sp38 DUF4834 LRRCT
Other DBs
NCBI-GeneID: 117942266
NCBI-ProteinID: XP_034723552
LinkDB
Position
3:complement(2872736..2926998)
AA seq 758 aa
MDRLVLCVLLCAALVKGHSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRKKDFFNMTSLVHLTLSRNTISQVTPHAFVGLRSLRALHMDGNRLSVIKTDYFK
GLINLRHLILGNNQIHQVAPTSFDEFVSTIEDLDLSNNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVQSEPTGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHLSTKPFV
MEGQGVTLKCKAVGDPDPEIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVLRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPEDSKTKVSSSMHSQTNGSQQRLQRSASKQPSDEGQQEAHAPKECM
ALVLRVDKEKKEDPAATTAILEVELPSLSVEKMKRRTSLDAQCSGPPSEDTQTDSSLTGS
TMSLCLIGPNAGTKEAPRLKDKKAALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq 2277 nt   +upstreamnt  +downstreamnt
atggaccggctggttctgtgtgtgctgctttgtgcagccctggtgaagggacacagctgc
cccggccgctgtatctgtcagcacctctcccccactctgactctgctctgcgctaagact
ggtcttttgtttgtgccccccaccatcgaccgcaagaccgtagaactgcggctcacggac
aacttcatcaccatcatccgcaagaaagactttttcaacatgactagtttggtccacctc
accttgtcccgtaacaccatcagccaggtcaccccccacgcctttgtcggcctgagatcg
ctacgggcgctccacatggatggcaaccgccttagtgtgataaagacagactactttaaa
ggcctaatcaacctgcgccacctcatcctgggaaataaccagatccaccaagtggccccc
acctcctttgatgagtttgtttccaccatagaggacttggatctttccaataacaacctg
cgcacccttccctgggaagccatagcacggatgaccaacattaacacgctcacgctggac
cacaacctgatcgaccacattggagcggggacttttacactgctcaccaagctggttcgc
ctggacatgacgtctaacaggttgcagaagctgcccccagacagcctgttccagcacgcg
caggtccagtccgagcccacgggatccagctcctccactctggcagtgagctttgggggc
aaccctcttcactgtaactgcgagctgctgtggctccgcaggctcacaagagaggatgat
ctggagacctgtgcgtcgccagagcacctcatggacaagtatttctggtcgatccaagag
gaggagtttatctgtgagcctcctctgatcaccaaacatctttccactaagccctttgtg
atggaaggccagggcgttactcttaaatgcaaagcagtgggtgatccagatccagagatt
cactggcggtccccagatggcaagctggtgcataataactcccgcaccatcctgtatgat
aatggcacccttgatattctcatcacaacgctgaaggacagcggggcatttaattgtgtc
gcgtccaatgccgcaggcatcgccacagctgctgtcgagatcaacatgatccccttaccc
ttgtttgttaacaacacaggccacatgcgtgaggacccaggcctctcagacattaccacc
tcctccaaatctggcaatgacaccaaaggctacgacaagcaggacaggagggtgatggtc
actgagctgacctcctcctccgctgtactccgttggccatctgagcgccacatccccggc
atcaggatgtaccagattcagtacaacagcacggcagatgatactttggtgtacagaatg
atcccatctacgagcaagaacttcttaatcaatgatctggctgcgggccgggagtatgac
ctttgtgtgctggcggtttacgacgatggcatcacatcgctaacggcaacacgtgtggtc
ggctgtgtgcagttccacacagccagtgaggtcagccagtgtcgctttatgcacagccag
ttcctgggaggcactatgatcatcattattggtggtataattgttgcgtcagtgctggtg
ttcattatcattctgatgatccgttacaaggcctatagcagcccagaggacagcaagacc
aaggtcagctccagcatgcactcgcagaccaatggcagccagcagcggctccagcgctcc
gcctccaagcaaccgtctgacgagggtcagcaggaagctcatgcgcccaaagagtgcatg
gcgctggtgctgagggtggacaaggagaagaaggaggatccagcggccaccactgccatc
ctggaagtggagctgccatccctgagtgtagaaaagatgaagagaagaacaagcctggat
gcacagtgctccggccccccatctgaggacacgcagacggacagtagcctgactggctcc
accatgtccctgtgtctcataggccccaacgctggcaccaaggaggctcccaggcttaag
gacaagaaagctgccctggccaacatgggattgctcccaaatgagctggcacgaactagg
catagattctcttttgacgggggggattactccatttttcaaagtcatagttacccacgc
agagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcgccgctc
gccaacaggcgagttacgttcagcagcactgagtggatgcttgagagcacagtctga

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