Etheostoma cragini (Arkansas darter): 117942266
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Entry
117942266 CDS
T07493
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117942266 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117942266 (lrfn1)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
SALM family
117942266 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117942266 (lrfn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
Ig_2
fn3
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
DUF4834
LRRCT
Motif
Other DBs
NCBI-GeneID:
117942266
NCBI-ProteinID:
XP_034723552
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Position
3:complement(2872736..2926998)
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AA seq
758 aa
AA seq
DB search
MDRLVLCVLLCAALVKGHSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRKKDFFNMTSLVHLTLSRNTISQVTPHAFVGLRSLRALHMDGNRLSVIKTDYFK
GLINLRHLILGNNQIHQVAPTSFDEFVSTIEDLDLSNNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVQSEPTGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHLSTKPFV
MEGQGVTLKCKAVGDPDPEIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVLRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPEDSKTKVSSSMHSQTNGSQQRLQRSASKQPSDEGQQEAHAPKECM
ALVLRVDKEKKEDPAATTAILEVELPSLSVEKMKRRTSLDAQCSGPPSEDTQTDSSLTGS
TMSLCLIGPNAGTKEAPRLKDKKAALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctgtgtgtgctgctttgtgcagccctggtgaagggacacagctgc
cccggccgctgtatctgtcagcacctctcccccactctgactctgctctgcgctaagact
ggtcttttgtttgtgccccccaccatcgaccgcaagaccgtagaactgcggctcacggac
aacttcatcaccatcatccgcaagaaagactttttcaacatgactagtttggtccacctc
accttgtcccgtaacaccatcagccaggtcaccccccacgcctttgtcggcctgagatcg
ctacgggcgctccacatggatggcaaccgccttagtgtgataaagacagactactttaaa
ggcctaatcaacctgcgccacctcatcctgggaaataaccagatccaccaagtggccccc
acctcctttgatgagtttgtttccaccatagaggacttggatctttccaataacaacctg
cgcacccttccctgggaagccatagcacggatgaccaacattaacacgctcacgctggac
cacaacctgatcgaccacattggagcggggacttttacactgctcaccaagctggttcgc
ctggacatgacgtctaacaggttgcagaagctgcccccagacagcctgttccagcacgcg
caggtccagtccgagcccacgggatccagctcctccactctggcagtgagctttgggggc
aaccctcttcactgtaactgcgagctgctgtggctccgcaggctcacaagagaggatgat
ctggagacctgtgcgtcgccagagcacctcatggacaagtatttctggtcgatccaagag
gaggagtttatctgtgagcctcctctgatcaccaaacatctttccactaagccctttgtg
atggaaggccagggcgttactcttaaatgcaaagcagtgggtgatccagatccagagatt
cactggcggtccccagatggcaagctggtgcataataactcccgcaccatcctgtatgat
aatggcacccttgatattctcatcacaacgctgaaggacagcggggcatttaattgtgtc
gcgtccaatgccgcaggcatcgccacagctgctgtcgagatcaacatgatccccttaccc
ttgtttgttaacaacacaggccacatgcgtgaggacccaggcctctcagacattaccacc
tcctccaaatctggcaatgacaccaaaggctacgacaagcaggacaggagggtgatggtc
actgagctgacctcctcctccgctgtactccgttggccatctgagcgccacatccccggc
atcaggatgtaccagattcagtacaacagcacggcagatgatactttggtgtacagaatg
atcccatctacgagcaagaacttcttaatcaatgatctggctgcgggccgggagtatgac
ctttgtgtgctggcggtttacgacgatggcatcacatcgctaacggcaacacgtgtggtc
ggctgtgtgcagttccacacagccagtgaggtcagccagtgtcgctttatgcacagccag
ttcctgggaggcactatgatcatcattattggtggtataattgttgcgtcagtgctggtg
ttcattatcattctgatgatccgttacaaggcctatagcagcccagaggacagcaagacc
aaggtcagctccagcatgcactcgcagaccaatggcagccagcagcggctccagcgctcc
gcctccaagcaaccgtctgacgagggtcagcaggaagctcatgcgcccaaagagtgcatg
gcgctggtgctgagggtggacaaggagaagaaggaggatccagcggccaccactgccatc
ctggaagtggagctgccatccctgagtgtagaaaagatgaagagaagaacaagcctggat
gcacagtgctccggccccccatctgaggacacgcagacggacagtagcctgactggctcc
accatgtccctgtgtctcataggccccaacgctggcaccaaggaggctcccaggcttaag
gacaagaaagctgccctggccaacatgggattgctcccaaatgagctggcacgaactagg
catagattctcttttgacgggggggattactccatttttcaaagtcatagttacccacgc
agagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcgccgctc
gccaacaggcgagttacgttcagcagcactgagtggatgcttgagagcacagtctga
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integrated database retrieval system