Etheostoma cragini (Arkansas darter): 117942270
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Entry
117942270 CDS
T07493
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117942270 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117942270 (efl1)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
GTPases
117942270 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
ARM_LRRK2
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117942270
NCBI-ProteinID:
XP_034723557
LinkDB
All DBs
Position
1:5373781..5472700
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AA seq
1119 aa
AA seq
DB search
MGHTSLEKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYRNGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLILELKLTSQEAYSHLQKILEQVNAVTGAL
FTSKVMEERAEKEKKEEEAEEEKESELLTGDQVYDWSAGLEEADDSQLYFSPDQGNVVFA
SAVDGWGFSIQQFAHIYSQKMGIKAEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKQLFVQ
LVLDNIWSLYDAVVTRRDKEKVEKVVASLGVKVMARDSRHSDPKVLLSAICSQWLPLAQA
VLSMVCEKLPSPIDMTAERVEKLMSVWPLRFDSLPEQTQELKRAFLQCSSGENQPLIIFV
SKMFVVDTKALPQNRQRTLTQEEIAQRRELARQRHADRMAADQTAAESHSQEGQPAGCDS
AKMEGLTLKDSQPEEDQQTFVAFARVYSGVAKKGRRVFVLGPKYDPARGLSMLPEGSSAW
DHVPAVPHLSVCSMDSLYLLMGRELEELDEVPVGNVLGIRGLEECVLKSATLSTTPACPP
FIPLNFEATPILRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEVH
LQRCLDDLRKRFAKIEISVSKPIIPFRETVVRPPKVDMVNEDLGKQHKVAIIHQVKEEAS
HGRPSDTLHVDHIGLVTLTTPNRLATVSVRAIPLPQEVTSLLESSTELIRTLEQVNMSLR
EGKSLDISPKTLEAIAGFKAQLESLLQGRKWRNAVEHIWAFGPRRYGPNILLNLVEGYQR
PSLWQCLGRGDQAGEARAQASGMRDLDNSIVSGFQLATLSGPMCEEPLMGVCFSVERWDI
QSAVLPQPQDFLEEDSKLHRAMTDNRVEGSGETWTGGSCQARRRPQAASADCYGPVSGQL
IAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLGKREGRVLHEEMKEGTDM
FIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPCWVPTTEEEYLHFGEKA
DSANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagcctggagaagatcattgcactgcagagaaaccctgccaacattaga
aacctttgcattctggcacatgttgaccatggcaaaactactctggctgactgcttggtg
gcaagtaatggtatcatatcaagtcggctggctgggaagctgagatatctggacagccgg
gaggatgaacagatcagagggatcaccatgaagtccagtgccatctccctgcattataga
aatggagatcaggactaccttctaaatctgatcgactctcctggtcacgtcgacttctcc
tcagaggtttccactgctgtccgcctgtgtgacggggccattatagttgttgatgctgtg
gagggagtgtgtcctcagacccaggctgtgctgcgccaggcgtggctggagaacatcagg
cctgtcctggtcatcaacaagatagaccgactcatcctggagctgaagctcacctctcag
gaagcttacagccacctgcagaagatcctggaacaggtgaacgcggtgacaggtgctttg
ttcacatccaaagtgatggaggagcgggcggagaaagaaaagaaggaggaggaagcggag
gaggagaaagaaagcgagctcctgactggagatcaggtttatgactggagcgctgggctg
gaggaggccgacgactcccaactctacttctcccccgaccaggggaatgtggtgtttgcc
agcgccgtcgatggctggggcttcagcatccagcagtttgcccacatctacagccagaaa
atgggtatcaaggcagaggtgctgctcaaaaccctatggggggatttttacctcaacgct
aaagcaaagaagatcatgaaaggagctcaggccaaaggaaagaagcagctgtttgtgcag
ctggtgctggataacatttggagtttatatgatgccgttgtgactaggagagacaaggag
aaggtggagaaggtggtagcatcacttggggtgaaggtgatggccagggactctcgtcac
tcggaccccaaagttcttctttctgccatctgcagccagtggttacctctggcccaggct
gtcctctcaatggtgtgtgagaaacttcccagtcccatagacatgacggcagagagggtg
gagaaactgatgagtgtctggccgctgcggttcgactcgctgcccgaacaaacacaagag
ctgaagagagcgttcctccagtgttccagtggggaaaaccagccactcatcatctttgtg
tccaagatgtttgttgttgacaccaaggcattgcctcagaacagacaaaggacgttgacc
caggaggagatagcccagcgcagggagctggctcggcagagacatgctgacaggatggca
gctgatcagacggcagcagagagccactcacaggaaggccaacctgcaggatgtgactcg
gctaagatggagggtctgactctgaaggactcccagccagaggaggaccagcagaccttt
gtcgcgtttgcgcgggtctacagcggcgtggccaagaaaggacgcagagtatttgtgctg
gggccaaagtatgaccccgcccggggcctgagcatgctgccagagggttccagtgcttgg
gaccatgtgcctgccgtgccccatctgtccgtctgttccatggacagcctctacctgctg
atgggccgggagctggaggagctggacgaggtgcctgtagggaatgtcctgggtatcaga
ggtttggaggagtgtgtattgaagtcggccacactgtccaccacccctgcctgccctccc
ttcatcccactcaactttgaggccacgcccattttacgggtcgcgatagaacccaaacac
ccaagtgagatgcctaagctggtgcgtgggatgcgtctgttgaaccaggcagatccctgt
gctgaggttctgatccaggaaacaggggaacacgttctggtcacggctggcgaggttcat
ctccaacgctgcctagacgacctcagaaagcggtttgctaaaatagagattagcgtgtcc
aagcccatcattccgttcagagaaacagtggtacgtcccccaaaagtggacatggtgaac
gaagaccttgggaaacagcacaaagtagccatcattcaccaggtgaaagaagaggcctct
catggccgtccgtctgacaccctccatgtggaccacattgggctggtcaccctcacaact
cccaacagactggccactgtcagtgtccgggccatccccctgccacaagaggtgaccagt
ctgttggagagcagcacggagctgattcggactctggagcaggtgaacatgtccctgagg
gaggggaagagtctggacatcagccccaagactttggaggccatagctggattcaaggcc
cagctggagagcctgctgcaggggaggaagtggagaaacgctgtggagcatatctgggcc
tttggccctcgcagatatggtcccaacatcctgctgaaccttgtggagggctaccagcgg
ccctcactgtggcagtgtctgggcaggggtgatcaagctggcgaggccagagctcaggcc
tccggtatgcgagatttggacaacagcatcgttagcggcttccagctggcaactctgtca
ggtcccatgtgtgaggagcccctgatgggagtgtgcttctctgtggagaggtgggacatc
cagtctgcagtcctgccacagcctcaggacttcttggaggaggactccaaattacatagg
gctatgacagacaacagagtggaaggaagcggtgagacatggacagggggttcgtgccag
gccaggcgcaggccgcaggcggcctctgcagactgctacggtccggtctccggtcagctg
atcgccgccatgaaggaggcctgccgccacgccttccaggctcagccccagaggctcatg
gctgccatgtatacctgcgagataatggccactgccgaggtgctaggccgagtatatggc
gtactggggaagcgagagggtcgtgtactccatgaagagatgaaggaagggacggacatg
ttcattatcaaggccgttctgcctgtggccgagagctttggatttgccgacgagatccgg
aagaggaccagcggattggccagtccacagctggtcttcagccactgggaggtgatcagc
agcgacccatgctgggttcccaccacagaggaagaatacctgcacttcggggagaaagcc
gactctgcaaaccaggccctgaaatacatgaacgctgtccgccgccgcaaaggtctctac
gtggaggagaagatagtcgagcatgcagagaaacagagaacactcggcaagaacaagtag
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