Etheostoma cragini (Arkansas darter): 117942304
Help
Entry
117942304 CDS
T07493
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC117942304
KO
K04613
vomeronasal 2 receptor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ecra04030
]
117942304
G protein-coupled receptors [BR:
ecra04030
]
Others
Chemoreception
Vomeronasal pheromone
117942304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
NCD3G
Peripla_BP_6
PMP1_2
Motif
Other DBs
NCBI-GeneID:
117942304
NCBI-ProteinID:
XP_034723599
LinkDB
All DBs
Position
3:9766936..9786959
Genome browser
AA seq
1780 aa
AA seq
DB search
MEISAFCIGLILSLGLCELNSALVLNGSEDDVKQRAGLTEDRTGAGVSTQTSSVKCKLQG
TTRLPAFAMDGDYIIGGVLSIHYYMYTVKHNYTTMPEPLRCTGSIDSRELRFSRAMIFAI
EEINNSTELLPGIKLGYRIYDSCASVPVTVHVAFQLSNGLDPVFYTRDNCSKSGMVMAVV
GESGSTPSISMSRITGPFNIPQVSHFATCACLSNKQQYPNFFRTVPSDQFQAEALAKLVK
HFGWTWIGAVRSDSDYGNNGMASFLDAARKEGICVEYSESFYRNHPRSRIQRVADVIRRS
TATVVVAFTSPGDMRILLEELSLEPSPPRQWIGSEAWVTDPDMLRFSFCAGAIGFGIQKS
FIPGLRDFLLDLSPSKLAASPVLTEFWEDAFNCRLEKSEKLFLTFTTGXKVMSTDKSVCD
GTEDIKTLQSPYTDTSQLRITNMVYKAVYAIAHAIHKAVCQETNSTTHCDKFTRIESKEV
LTQLKKVNFSKNGYDVSFDANGDPVARYELVKWQKSESGSIKLVTVGQYDASMPVGQKFQ
INRNLTWVDGGTQVPVSVCTDSCSPGTRKVLQKGKPICCYDCILCPEGEISNATDSPDCY
PCPKEFWPNAERHNCLPKPVEFLSYNEVLGIILATFSVGGACLTIITVVVFYRHRTSPIV
RANNSELSFLLLFSLTLCFSCSLTFIGAPSEWSCMLRHTAFGITFVLCMSCVLGKTIVVL
MAFRATHPGSNVMKWFGPPQQRMTVVSFTLIQVLICTIWLVLSPPFPMKNLTMFKERIIL
ECAFGSAVGFWAVLGYIGLLAVFCFALAVLARKLPDNFNEAKLITFSMLTFCAVWITFIP
AYLSSPGKFTVAVEIFAILASSFGLILCIFAPKCFIILFKPEKNTKKYLMNKNRGMEISA
LCIGLILSLGLCELNSALVLNGSVDDVKQRAGLTEDRTGAGVRAQTSFVKCKLQGTTRLP
AFSMDGDYVIGGVLSIHYNMYTVKHNYTTMPEPLRCAGSINTRELRFSRAMIFAIEEINN
STELLPGIKLGYQIYDACGSVTVAVHVAFQLSNSLDSVFYTGDNCSQSGMVMAVIGESGS
SPSISMSRIIGPFNIPQVSYFATCACLSNKLQYPNFFRTIPSDQFQADALAKLVKHFGWT
WIGAVRSDSDYGNNGMATFLEAAHKEGICVEYSESFYRTHPRSRIQRVADVIRRSTAMVV
VAFTSPGDIRILLEELSLEPSPPRQWIGSESWVTAPDLLRFSFCAGAIGFGIQKSVIPGL
RDFLLDLSPSKVAASPVLTEFWEGAFNCRLGKSETGVAIEKRLCDGTEDIKMLQSSYTDT
SQLRITNMVYKAVYAIAHAIHKAVCQETHSTTQCEKFTRIESKEVLTQLKKVNFTQNGYD
VSFDANGDPVARYELVNWQKSERGGIELVTVGQYDESLPVGQKFQITRNLTWVNGSTQVP
VSVCSDSCPPGTRKLLQKGKPICCYDCIPCPEGEISNATDSPDCFPCPKEFWPNEERDTC
LPKPVEFLSYKEVLGVILATFSVGGACLAIITAAVFYRHRTSPIVRANNSELSFLLLFSL
TLCFLCSLTFIGAPSEWSCMLRHTAFGITFVLCMSCVLGKTIVVLMAFRATLPGSNVMKW
FGPPQQKMTVVSFTLIQVLICSIWLGLSPPFPMKNLTIYKERIILECALGSAVGFWAVLG
YIGLLAVFCFVLAALARKLPDNFNEAKLITFSMLIFCAVWITFIPAYLSSPGKFTVAVEI
FAILASSFGLILCIFAPKCFIILLKPEQNTKKHLMNKNQS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggagatctctgctttctgtattggtctgatcctgtctctgggtttgtgtgaactaaac
tcagctcttgtcctgaatggttctgaggatgatgttaaacaaagggctgggcttacagag
gatagaactggtgctggggtcagcactcagacttcatctgtgaaatgtaagctccagggt
accactcgtcttcctgcatttgcaatggatggtgactacattattggtggtgttttgtcc
atacactactacatgtacacagtgaagcataactacaccaccatgcctgagccattaaga
tgcacaggaagcattgactcccgtgaactgcgcttctcccgtgcaatgatcttcgccatc
gaggagataaacaacagcacagagctgctgccgggaatcaaactcggttatcggatctat
gactcgtgcgcctcggtgcccgtgacggtgcatgtggccttccagctttcaaatggcctg
gacccggtgttttatacccgcgacaattgctcaaaatctggtatggtgatggctgtcgtt
ggtgagtctgggtccacgccatccatcagcatgtcgcgcatcactgggccctttaacatc
cctcaagtgagccactttgccacttgtgcatgtctgtccaataagcagcagtaccccaat
ttcttcagaaccgtccctagtgatcaattccaggctgaagcgctggccaagctggtaaaa
cactttggctggacttggataggagctgtccggtcagattcagactatggcaataatggt
atggcgtctttcctggacgcagcacgcaaagaggggatctgtgtggaatactcggaatct
ttctatcggaatcacccacgtagcaggatccagagagtagctgatgtgatccgcaggtcg
acagctacggttgttgtggcatttacatcccctggagacatgaggattctgctggaggag
ctgtcactcgagccttctccacctcgccagtggataggcagtgaagcctgggtaactgac
ccagacatgctgaggttcagcttctgtgctggagccataggatttggcattcagaaatct
ttcatcccaggtctgagagacttcttgctggatctctctccatctaaattggctgcctct
ccagtgcttactgagttctgggaggatgcattcaactgcaggctggaaaaaagtgagaaa
ctatttcttacattcaccacaggatagaaagtcatgtccacagacaagagtgtgtgtgac
ggaacagaagacataaagacactccagagcccgtacactgacacatctcagctccggatc
actaacatggtatacaaagctgtttatgcaatagctcatgccattcataaagcagtgtgt
caggaaacaaattctacaactcattgtgacaaattcaccaggatagaatccaaagaggtt
cttactcagctaaagaaagtaaatttttccaaaaatggttatgatgtgtcatttgatgcc
aatggtgatcctgtggccagatatgaactggttaaatggcaaaaaagtgaaagtggcagc
atcaaattggtgacagtagggcaatacgatgcatcaatgccggtgggccagaagttccaa
atcaacaggaacctcacctgggtggatggtggcacacaagttcctgtgtcagtgtgcact
gatagctgttctcccggaactcgtaaagtactgcagaaaggaaaacccatctgctgttat
gattgtatactgtgtcccgaaggagagattagcaatgccacagattcccctgactgttac
ccttgccccaaggagttctggcctaatgcagagagacacaattgtctccccaagcctgta
gagtttctttcctacaacgaggtcctaggaatcatcctggctacattctcagttggtggt
gcctgtctgaccattataacagtggttgtgttctatcgtcacaggacatcgccgattgtc
agggccaacaactctgagctgagcttcctgctgctcttctccctgactctatgtttctca
tgttcattaactttcatcggagcaccctctgagtggtcctgcatgctacgccacacagcg
tttgggatcaccttcgttctctgtatgtcttgtgttcttggaaaaacaatagtagtgtta
atggcatttagagcaacacacccaggtagtaatgtcatgaaatggtttggtcctccacag
caaagaatgactgtagtgtcttttacacttattcaagttttaatatgtaccatttggttg
gttcttagtcccccttttccaatgaaaaacctaactatgttcaaagagagaatcattttg
gagtgtgcatttggctcagctgttgggttctgggctgtgctcgggtacataggtctactg
gctgtcttctgttttgcgttagctgtcctggctcggaaattacctgataattttaatgaa
gccaagctcatcaccttcagcatgttgacattctgtgcagtctggatcacctttatccct
gcatatctcagctctcctgggaaatttactgtggctgtggagatatttgccattctggcc
tccagttttggattaatactgtgtatatttgccccaaagtgtttcattatattgtttaaa
ccagagaaaaacacaaaaaaatatttaatgaacaaaaatcgagggatggagatctctgct
ctctgtattggtctgatcctgtctctgggtttgtgtgagctgaactcagctcttgtcctg
aatggttctgtggatgatgttaaacaaagggctgggcttacagaggataggactggtgct
ggggtcagggctcagacttcatttgtgaaatgtaagctccagggtaccactcgtctccct
gcgttctcaatggatggtgactacgtaataggtggtgtcttgtccatacactacaacatg
tacacagtgaagcataactacaccaccatgcctgagccactaagatgcgcaggaagcatt
aacacccgagaattgcgattctcacgtgcaatgatctttgccatcgaggagataaacaac
agcacggagctgttgccaggaatcaaactcggttatcagatctatgacgcgtgcggctcg
gtgaccgtcgcggtgcatgttgcattccagctttcaaatagcctggattctgtgttttac
actggtgacaattgctcacaatctggtatggtgatggctgtcattggtgagtctgggtct
tctccatccatcagcatgtcgcgcatcatcgggccctttaacatccctcaagtgagctac
tttgccacttgtgcatgcctgtccaataagctgcagtacccgaatttcttcagaactatc
cccagtgatcagttccaggctgacgcgctggccaagctggtaaaacactttggctggact
tggataggtgctgtccggtcagattcagactacggcaataatggtatggcgactttcctg
gaagcagcacacaaagaggggatctgtgtggaatactctgaatctttctatcggacccac
ccacgtagcaggatccagagagtagctgatgttatccgcaggtcgacagctatggttgtt
gtggcatttacatcccctggagacataaggatcttgctggaagagctgtcactcgagcct
tctccacctcgccagtggataggcagtgaatcgtgggtaactgccccagacttgctgaga
ttcagcttctgtgctggagccatcggatttggcattcagaaatctgtcatcccaggtctg
agagacttcttgctggatctctctccttctaaagtggctgcctccccagtgcttactgag
ttctgggaaggtgcattcaattgcaggctgggaaaaagtgagacaggtgttgccatagaa
aagagattatgtgacggaactgaagacataaagatgctccagagctcgtacactgacaca
tctcagctccggatcactaacatggtatacaaggctgtttatgcaatagctcatgccatt
cataaagcagtgtgtcaggaaacacattctacaactcagtgtgaaaaattcaccaggata
gaatccaaagaggttcttactcagctgaagaaagttaattttacccaaaatggttatgat
gtgtcgtttgatgccaacggggatcctgtggcaagatacgagctggttaactggcaaaaa
agtgagcgtggcggtattgagttggtgacagtaggacaatacgatgaatcactgccggtg
ggccagaagttccaaatcaccagaaacctcacctgggttaatggtagcacacaagttcct
gtgtcagtgtgctctgacagctgtcccccaggaactcgtaaattgctgcagaaaggaaaa
cccatctgctgttatgattgcataccatgtcctgagggagagattagtaatgctacagat
tcccctgattgtttcccttgccccaaggagttctggcctaatgaagagagagacacttgt
ctccccaagcctgtagagtttctttcctacaaagaggtcctaggagtcatcctggctaca
ttctcagttggtggcgcctgtctggctattataacagcagctgtgttctatcgtcacagg
acatcgccgattgtcagggccaacaactctgagctgagcttcctgctgctcttctccctg
actctatgtttcttatgttcattaactttcattggagcaccctctgagtggtcctgcatg
ctgcgccacacagcgtttgggatcaccttcgtcctctgtatgtcttgtgttcttggaaaa
acaatagtagtgttaatggcctttagagctacactcccaggtagtaatgtcatgaaatgg
tttggtcctccacagcaaaaaatgactgtagtgtcttttacgcttattcaagttttaata
tgtagtatttggttgggtcttagtcccccttttccaatgaaaaacctaaccatatacaag
gagagaatcatcctggagtgtgcattgggctcagctgttgggttctgggctgtgctgggg
tacataggtttactggctgtcttttgctttgtgttagctgccctagctcggaaattacct
gataactttaatgaagccaagctcattaccttcagcatgctgatattctgtgctgtctgg
atcacctttatccctgcatatctcagctctcctgggaaatttactgtggctgtggagata
tttgccattctggcctccagttttggactaatactgtgtatatttgctccaaaatgtttc
atcatattgttaaagcctgagcaaaacacaaaaaaacatttaatgaacaaaaatcaatcc
taa
DBGET
integrated database retrieval system
