Etheostoma cragini (Arkansas darter): 117942373
Help
Entry
117942373 CDS
T07493
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117942373 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117942373 (rsf1a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117942373 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
Motif
Other DBs
NCBI-GeneID:
117942373
NCBI-ProteinID:
XP_034723693
LinkDB
All DBs
Position
3:28215128..28230034
Genome browser
AA seq
1450 aa
AA seq
DB search
MAAPVVVRSSGPALCPSFAEVCSFLERFGAALDLPEMTYPQMERYLRDTTTVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCLELNSTWAWELEQKGYQEMSMECKSCILKYLCECQF
DDNLKFKMAINEEEPEKMRLQPIGRDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKSQVEPKQNQDQNQAGSRSASPTEKDAGKDGIGSTDPEPAKTTEER
TDSERVDPVKEEELLTPVIKLEESTKLENPGAEVKEEKTDHKASPVFDNRVSTITTVIKS
ESRDPDAPKNAVSVVMAPGATVTKPDLNKEEEVERAVVRSNQQAKIPLKKRELKLAESYH
SNHLNNSNSSSIIVCNPSVIQTKDSQEKEGKLPSSLAPPGGPAASQPQQQEAVTAPRQKL
SNGRASLPLTHKEGQNGVIGVIGQVGVVSHVGVIRSPSERHRAPGAEQQEQNGPSLDHRG
SRAGEDEREVSRQSVLVRKGPVEGETPAAAAPPLPPPAAAMEAQTARKLSLSSLKSDPVS
EAVERKVDSVTLPSLSQSTEDQGKKVTEEQFDRGGGPGHSSHQQKDDNLNERKERRREAS
GHLEAEEGSKGDHDKNKSTLGKSESGSTTPLLKVDQQDKEDHQEDGVNGGLAVQVRVKDT
GLGSVERQGPLEEASSELQKEGIRLKIKIPPHRRNKLRGKGGKEEEKEREQEAQEDGRAL
RRSARICRPSSKVTESQRKKPQKKQARPDRTREEEEEEEDEEEEEEEEEERSSTTKNDGT
TEPGTQIRKQRGKRRHRRPRWSNIRAKRRKLNEGEEVEDRGRKKGEGESEGGSDSEQSCK
SDEIPSEDACSHCGLPNHPELILLCDSCDNGYHTACLRPPLMLIPDGEWFCPPCQHKLLC
EKLEEQLQNLDSALKKRERAERRRERLVYVGISVENIIPEGDEVEEEKTAKKKDPKKSKN
LGRRSTRTRKHISYRFDDFDDAIDEAIEEDIRDLCGGAGQGRDITAILSEDGKESQRPIR
SQAHSASRNRSRNRKKRRLNDLESDSTAAESEDEFMLSNSSEDEEFAASGADDDEEDEDA
GSDVGSLESGTRPRRAVKGAPKHRPSKTQRRGRKRLRRRRRRSSEEEEEDTDEELGSDQF
SNTTDSETDKKRRGLRRGQRQQVNYRETSESSDNSRTSAKKVRVKPRGRPRKERLSSDYS
DVSPSSRDSEEEDYEDEEEDDQRRRVNKRRRQEEDLRRHRTGEKRRRFRHHEDEEDDRER
GRRLKRKLLEKEKDRDKRRRLKRTEKEEEDLEKMGRGKRREILSQQRRKRLAQMLKKRRP
STDEEDESESDASDSSSEEDRPVRKRLNRIDSDEDDEEEDEELEEEEEETQKVTTKKADQ
RADSDTQEKGRGRSLSPSHGHRTARGPAKPGPGGPAEPTDSAGSGMQGRHNGPLHPGQGQ
GEGQGEGQGE
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggtggtggtgaggagctccggcccggcgctctgcccgagcttcgcggag
gtctgttcgttcctggagcgattcggagcggcgttggacctgcccgagatgacctaccca
cagatggagaggtatctgcgggacacaacgaccgttcctaaacctcttgtggagctccat
gtgaagctgctcagaaaactggggaggtctgttactactgaccgctgggaaaaatacctg
gctaaggtttgtctggagttgaacagtacctgggcatgggagctggaacagaagggctac
caggagatgtccatggagtgcaagtcatgcattctcaaatatctctgcgagtgtcagttc
gacgacaacctaaagttcaagatggcgattaacgaggaggaaccagagaagatgcgtctg
cagcctataggtcgggaccagcagggcctgatgtactggcttcagctagaccaggagcag
aatatccggctgtacacggaggagcaggacgatctggacggatccacctggaagtgcatc
gtcaggactcggaacgacctcgctgaggctctggagctactgaagtcccaggttgaacca
aaacagaatcaagaccagaaccaggccgggtccaggagtgccagccccacagagaaagat
gcagggaaagatggcattggtagcactgaccccgaacccgccaagaccacagaggaacga
accgacagtgagagggttgaccctgtaaaagaagaagaactcctaacaccagtgataaag
ctggaggaatccacaaagctggagaaccccggtgctgaggtgaaggaagagaagacggac
cacaaagcatcgcctgtgtttgataaccgcgtgagcaccatcaccaccgtcatcaaatca
gagtccagggacccggacgctcccaaaaacgccgtgtcggtggtcatggcgccaggtgcg
actgtgacaaaaccagacctgaacaaggaagaggaagtagagcgggcagttgtcaggagc
aaccagcaggccaagataccactgaagaagagggagcttaagctcgctgagagctaccac
agcaaccaccttaacaacagcaacagcagcagtattattgtctgtaacccgtcagtgatc
cagaccaaagacagtcaggaaaaagaggggaagttgccgagctcgttagcgccccctggt
ggtccagctgcctcacaaccccagcagcaggaagccgtcactgcaccgaggcaaaaactg
agcaacgggagagcgtctctccccttgacgcacaaagagggacagaatggagttataggg
gtcataggtcaagttggcgttgtaagtcacgtaggggttatccgcagcccatctgagcgg
cacagagcccccggtgctgagcagcaggaacaaaatgggcccagtttggaccacagaggc
tccagagctggggaggatgagagggaagtgagccggcagtcagtgctggtaaggaaggga
ccggttgaaggggagacgccagcagcagccgccccccctcttcctcctcctgcagcagcg
atggaggctcaaacagccagaaaactatcgttgtcatccttaaaatctgatccagtctct
gaagctgtagagagaaaagtggattctgttactcttccctcgctgtctcagtccacagaa
gaccagggtaaaaaagtaacagaggagcagtttgacaggggggggggacctgggcacagc
agtcatcaacagaaggatgacaacctgaatgagaggaaagagaggagaagagaggcgtcc
gggcacctcgaggcagaagaaggaagcaaaggtgaccatgacaagaataaaagcacttta
ggaaagtcggaatcagggagcaccactccacttctaaaagtagaccagcaggataaagag
gaccaccaagaagatggggtcaatgggggtttggctgtccaggttagggtgaaggacact
gggcttggatcggtggagaggcagggtccattggaggaagcctcctcggagctccagaaa
gaaggaatccggttgaagatcaagattcccccccaccggagaaacaagttgaggggaaaa
gggggaaaggaggaggagaaagagagggagcaagaggcgcaagaagatgggagggcgctg
aggagatctgcaagaatttgcaggccgagctcgaaggtgactgagagccagaggaagaaa
ccacaaaaaaaacaggcacggcccgacagaacgagggaagaagaagaggaggaggaggat
gaggaggaggaggaagaagaggaagaggagcggagctcaactacaaagaacgatggaaca
acagaacctggcacgcaaattaggaagcagaggggtaaacggaggcatcgacggccccga
tggtccaacattcgtgctaagagacgcaaactgaacgagggagaggaggtggaggacaga
gggaggaaaaaaggagagggggagagtgagggagggagcgactctgaacaatcatgtaaa
tcagacgagattcccagtgaggacgcctgcagtcactgtggcctgcccaaccaccctgaa
ctgatcctgctgtgtgactcttgtgataatggataccacactgcctgtctgcggccgccc
ctcatgttgatcccagatggagagtggttctgtcccccctgccaacataagctgctgtgt
gagaaactggaggagcagctgcagaacctggacagtgctctgaagaaaagagagagagca
gagaggaggagggagcggctagtgtacgtgggaatcagtgtggagaacatcatccctgag
ggagacgaagtggaagaggagaagactgcaaaaaagaaagatcccaaaaagagcaaaaat
ctcgggaggagatcaacccgaaccaggaaacacatcagctacaggtttgatgactttgac
gatgccatcgatgaggctatagaggaggacatcagggacctctgtggaggagcagggcaa
ggcagagacatcaccgccatcctatcagaggacgggaaggagagccagcggccaatcaga
agccaggctcactctgcatccaggaacaggagcaggaacaggaagaagcggaggctgaat
gacctggagagtgacagcactgcagcggagagtgaagacgagttcatgctcagcaacagc
tcagaggacgaggaatttgctgcgtcaggtgctgatgatgacgaggaagatgaagatgcg
ggcagcgacgtgggcagcttggagagtgggacccgcccccgacgggcagtgaaaggggca
cctaagcaccggcccagcaagacccaacgcaggggcaggaaacggctgagacggcggcgg
agacgctcctccgaggaagaggaggaagacactgatgaagaactgggctcggatcagttc
agcaacacgaccgacagcgagacggacaaaaagaggcgtggtctgcggcgtggccagcgg
cagcaggtcaactaccgcgagacgtcggagtcgtccgacaactcccggacgtccgccaag
aaggtcagagtgaaaccccgcggcagaccacgcaaggagcgtctctccagcgactacagc
gatgtgtcgccttcttccagagactcggaggaggaggattatgaagacgaagaggaggat
gaccagagacgaagagtgaacaagaggaggagacaggaggaagacctccggagacacagg
acgggggagaagcggaggagattcagacaccacgaggacgaggaggacgaccgagagaga
gggaggcggctgaaaaggaaactgttggagaaggagaaggacagagacaagcggaggagg
ctaaagaggacggagaaagaagaggaggacctggagaagatgggcagagggaagaggaga
gagattctgtcacagcagcggcgcaaacggctcgctcagatgctgaaaaaaaggcggcct
tcaacagacgaggaggacgagtcggagtcggacgcatcggactcgtcgtcggaagaggat
cgtccggtccgcaaaagactcaaccgcattgactctgatgaagatgatgaagaggaagac
gaggagttggaggaagaagaggaggaaacccagaaggtgacgacgaagaaggcggatcag
agggccgacagcgacactcaggaaaaggggagaggccgtagtctgtctccgtcacacgga
catcggaccgccagaggcccggcgaagcctggacccggaggtcccgctgagcccacggac
agtgctggatcaggcatgcagggcaggcacaatggccccttacacccggggcaggggcag
ggggaggggcagggggaggggcagggggag
DBGET
integrated database retrieval system