Etheostoma cragini (Arkansas darter): 117942404
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Entry
117942404 CDS
T07493
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117942404 (trim59)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117942404 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_10
Rootletin
BAR_3_WASP_bdg
MgrB
Metal_resist
Spectrin
Motif
Other DBs
NCBI-GeneID:
117942404
NCBI-ProteinID:
XP_034723725
LinkDB
All DBs
Position
3:complement(11132962..11136873)
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AA seq
435 aa
AA seq
DB search
MDNVEEDLTCSVCYSLFSDPRVLPCSHTFCKTCLDNLLQASTNYSIWRPLRLPLKCPNCR
SVVELPPMGVDALPTNVCLRAIIEKYQSDSAPRPPSCQEHHRQPLNMYCIQDRQLICGLC
LTVGRHQGHPIDDLQAAFIREKPTPSLLLARLSEQRWAQVCELGEQLEQEKARCEGLVRQ
DRQEVNQFFQTLEVVLARKRHAYLEALDKAGAEVSRAYDPLIHKVKELQEEQLDLVSLGS
SVEEEDSPLVFLEQVHLFRERVEEFVKTPLPSVINLSVTPRAAEHLQQHWPAVTIGSLEE
APVPKVCCCARCGCVETGVEAGEGADAGRGQSGSWVHKLWPASSVVLAGGLLLLLVAALW
VNPVGGASLGFSLLSQLSQLVHGLSSDLVTSLWDTVRAEHAVMEATVERWSSHLSSVGEK
AFQQLAALFKTLTLH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgtggaggaggacctgacgtgctctgtgtgctactcgctgttctctgatccg
cgagtcctgccgtgctcacacaccttctgtaagacctgcctggacaacctgcttcaggcg
tctaccaactattccatctggcgtccgctccgcctgccgctaaaatgccccaactgccgc
agcgtggtggagctgcccccgatgggcgtagacgctctgcccaccaacgtgtgcctgcgg
gccatcatcgagaaataccagagcgacagcgcgccgcgacccccttcctgtcaggagcac
cacaggcagcctctcaacatgtactgcatccaggatcggcagctgatctgtgggctgtgt
ctgactgtcgggcggcaccagggccatcccatagatgacctgcaggcggcattcatcaga
gaaaaaccgaccccgtcgctactgctggcccgactctccgagcagagatgggcacaggtg
tgtgagctgggggagcagctggaacaggagaaagcccgctgtgagggtctggtgaggcag
gaccgacaggaggtcaatcagttttttcagacgctggaggtggtgctggccaggaagaga
cacgcctacctggaagccctggacaaagctggggcagaggtgtcccgggcctacgaccca
ctcattcacaaagtgaaggagctgcaggaagagcagttggacctggtgtccttgggttca
tcagtagaggaggaggactcaccgctggtcttcctggagcaggtgcatttattccgagag
agggtggaggagtttgttaaaacccctctgccctcagtgataaacctctccgtcaccccg
cgggccgcagagcaccttcagcagcactggcccgctgtgaccatcgggagcctggaggaa
gcgcccgtccctaaggtgtgctgctgcgccagatgcggctgtgtggagaccggggtggag
gccggagagggagccgatgcgggaaggggccagtccggcagctgggtgcacaagttgtgg
cctgcttcttccgtggtgctggcgggggggctgctgctgctgctggtggctgcgctgtgg
gtcaacccggtcgggggggcgtcgctcggtttctctctgctctcccagttgagtcagtta
gtccacggcctgagcagcgacctggtcacgtctctctgggacacggtgcgcgcagaacac
gcggtgatggaggccacggtagaaagatggagctcccacctctcctcagtgggggagaag
gccttccagcagctggccgccttattcaaaactctgacgttacactga
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