KEGG   Etheostoma cragini (Arkansas darter): 117942432
Entry
117942432         CDS       T07493                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03082  ATP-dependent chromatin remodeling
ecra03083  Polycomb repressive complex
ecra04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117942432
   03083 Polycomb repressive complex
    117942432
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117942432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecra03036]
    117942432
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117942432
  Histone modification proteins
   HAT complexes
    HATB complex
     117942432
   HDAC complexes
    Sin3A-HDAC complex
     117942432
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117942432
    PRC2.2
     117942432
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117942432
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117942432
  Chromatin remodeling factors
   NuRD complex
    117942432
   NuRF complex
    117942432
   NuRF complex (fruit fly)
    117942432
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_RIG_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR19_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 117942432
NCBI-ProteinID: XP_034723780
LinkDB
Position
1:complement(4858749..4872116)
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPTKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKERKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctgataaagaggtgtatgacgatgctgtggaagaaagggtcatcaatgaagagtac
aagatttggaagaaaaacacacctttcctttatgacctggtgatgacgcatgcgctggag
tggcccagccttactgtccagtggcttccagatgtcagcaggcccgagggaaaggactac
gcagtacaccggctggtgttagggacccatacgtccgatgagcagaatcacctggtgatt
gccagcgtccaagtaccaaatgatgacgcccagtttgatgcctcgcactacgacagcgag
aaaggagcagagtttggtggatttggttcagtgagtgggaaaatcgagattgaaattaag
atcaaccacgagggagaggtcaacagagcccgctacatgccccagaaccactgcatcatc
gccaccaagacccccacctctgacgtgctggtcttcgactacaataagcacccgactaag
ccagatcccagcggggagtgcagtcctgacctgcggctgaaaggccaccagaaagaaggc
tatgggctttcctggaatcccaaccttagcggcaacttactcagcgcctctgacgaccac
accatctgtctatgggacatcggggcgggcccaaaggaaaggaagattgtggatgccaag
accatcttcaccggacacacagcggtggtggaagatgtttcctggcatttactccacgaa
tccctgtttggctcagtggcagacgaccagaaactcatgatatgggacactcggtccaac
accacatccaaagccagccacgccgtggacgctcacactgctgaggtcaactgtctcagc
ttcaacccctacagcgagttcatcctcgccaccggctctgctgacaagactgttgcactg
tgggatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtccaatggtctccacacaatgaaaccatcctggcgtccagcggcaccgaccgg
cgactcaacgtctgggacctcagtaaaatcggggaggagcagtcagcagaagatgctgag
gatggcccaccagagctgctgttcatccacggtgggcacacagccaagatctccgacttc
tcctggaaccccaacgaaccctgggtcatctgctcggtgtcagaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaatgacgaggagccggacaacacccctgcatca
gagctggaggctcagggatcataa

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