Etheostoma cragini (Arkansas darter): 117942439
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Entry
117942439 CDS
T07493
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117942439
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Other
117942439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_6
V-set_CD47
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
117942439
NCBI-ProteinID:
XP_034723786
LinkDB
All DBs
Position
3:complement(12548040..12654777)
Genome browser
AA seq
2086 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTLFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
QSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTESVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNSFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLRHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKAALAGIGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHLKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDTWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNTIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELKGLEKFTNYSNQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPEQLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPKGTWAWQTVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALTMGHSGLSSLTSSGGATG
ACGGGSGGVSASSSSSTLPQRTLTMPGSSASAAQSAAAAAAATAAAAAASSSSGATGGTP
GGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacacggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccgccggagacgacatttatgacgtgccccatatccgccacgtgcatgccaatggc
accctccagctctaccccttctccccttccgcctataacagcattatccacgacaacgag
tacttctgcactgctgagaaccaagcaggcaagattcgtagccccagcatccacatcaaa
gcagtattcagggagccctacacagtccgtgtggccgatcaacgctccatgcggggtaat
gtcgctgtgttcaagtgcctcatcccctcagccgtccaggagtacgtcagcgtggtgtcc
tgggagaaggacaccgtctccatcgtcccaggaaaccgtttcttcctgaccttatttggc
gctctgtatatctcagaagtgcagaaggaagatgctctgtccacctaccgctgcatcaca
aagcacaaatacagtggagagactcgacagagcaatggagccaggctctcagttatggac
cctacggagtccaccccgtcagtgctggacagtttccagtctggtgaggtgcaggtgggg
cagagtgtggagctcccctgcatcgcatccggatacccaaaccccaccataagatggcta
aaagatggtcggccattacctgcagactcgcgctggacacggcgcatcactggcctcacc
atttccgacttgaggcttgaggatagtggcaattacatctgtgaggtcaccaacagcttt
ggctccaaagaggtgacaggtcacctgaacgtcatagagccactgcgggtcaccttgtct
cccaagaacctgaagacagggatcagcagcacagtcatcctgtcctgtgctgtccagggt
tcccctcactttacggtgtcctggtaccgtaacacagaatcagtcctgccagaccaacac
ttttccatccagggggctcacaatgagacattgttcatttccgctgcacaaaagagacac
tctggagcttaccagtgctttgccacacgcaagggccagacggcccaggacttctccatc
atattgctagaagatggtacaccccgcattgtagcctccttcagcgagagggtggtggtc
ccaggtgagccgttttccctgatgtgcgccgccaaaggagcgcctcctcccaccatcacc
tggactctggacgacgagcctgtggcccgggacctgtcgcgtgtcagagccagccagtac
acgctctctgatggcagcactgtgagccacgtcaacgtcagcagcccgcagattcgagat
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtccaccgaggattcgacctatgaagaacattaccgcagtggcagga
agaaactctttcattaactgccgtgtgattgggtacccttattactcaatcaactggtac
aaggaggggctactgctacctgacaatcatcgccaggttgtgtatgagaacgggactcta
aagctcagtgatgttcagaaggggatggatgagggagcctatgtctgcagcgtactaatc
caaccacagctgttcatcacacagaccgtctatgtcactgtcaaagttcctccactgatc
cagccgtttgactttccaccgacttccattggtaaattgatgtacatcgcctgcgtagtg
tcgtctggagacatgcccatacgcatcacgtggcgcaaggacgggcaggagattgtgccc
tcctcgggcatcaccatcgacacaaaggagttcatgagctccctccagatatccaaggtg
tcgctcagacacaatggcaactacacctgcattgccagcaatgatgctgccactgtcagc
acagagaggcagctcacagtaacagtgcctccacggtttgtggttcagcccaacaatcag
gatgggatctatgggaaggctgggatcctaaactgttcagtagatggataccctcctcca
aaggtcatgtggaagcatgccaaagctgcactagcgggtattgggaatccgcagcagtac
caccctgtgcctctgacgggccgtattcagatcatgagtaacggctctctgctcatcaga
catgtcctggaggaggatcgtggcttttacctctgtcaggcctccaatggcgttggctca
gacatcagcaagagcatggtcctcaccgttaagatcccagcgatgatcaccagtcacccc
aacactaccatggctaagaagggtcacttgaaggagctaaactgtacagccaggggagaa
tggcccatcatcatccgctgggagagaggggacactgtcattgaccctgaccgcaacccc
cgctactccattaccaccagtcccaatgagaagacagacgaggtgttgtctacactcaag
ctcaaaccagcagagcgggaggattcagtcttcttctcctgtcatgccatcaactcttac
ggagaaggacgtggccttatccagctcactgtgcaagagcccccagaccctccagagttg
gaggtgcgagaagtgaaagatcgcagtatgaatctccgttggacacagagatttgatgga
aacagtgtcattacctcctatgatattgagtataagaacaagacagacacttgggagctg
aagcacgccactcgaaatatctcccccaccaacaatcaggccaacatagtggacctccac
cctgcctccgtctacagcatccgcatgtactcatacaatacaataggcaagagcgaggcc
agtaaggaactcactatcagtacagaggaagcacagcctgatggtcctcccatggaggtg
attcttcagccagtgacctctcagagtatcagggtcacctggaaggctcccaggaaggag
ctgcagaacggggtgatccggggttaccagatcggttacagagagaacggcccgggcagt
aacggccagtacagcattgtggagatgaaggccactggagacagtgaggtctacaccctg
gacaacctgaaaaagtttgcccagtatggtgtggttgtccaggccttcaatagagccggc
acagggccctctagttcagagatcaatgctacaacactggaagatgtgcctagccagcct
ccccaaaatgtgcgcgccatttctgtaacatcagacgaggccgtgatcacgtgggctgaa
cctcccaggatgacactgcatggcgtattgaaaggctaccgtgttgtgttctgggctgtc
tttccggatggagaatggggtgagatgcaaaacataacaaccaccaaggagcaggtggag
ctcaaaggcctggagaagttcaccaactacagcaaccaggttctggcctacacccaggct
ggagatggggtccggagcaacgtcctgtacatccaaacccgtgaagactacccaggaccc
ccagctggcatcaaagctgtgccctcctccgccagcagtgttgtagtgtcctggttacct
cctcacaagccaaatggaatcatccgcaagtacaccatatattgctccagccccgggtca
ggccaaccgctgcccagtgagtatgaagccaatccagagcagctgttctacagaatcact
caccttaaccaccggcagcagtacctgatctgggctgcagccgtcacaactgcaggccgg
ggcaacttcagcgacaaggtcactgtggagccagcagccaaggccccagctaagatcctg
tcatttgggggcacagtgaccactccctggatgaaggaggtacgactgccctgtagctca
gtaggagaaccaacacctactataaaatggaccaaagatagtgaggacacagctatccca
gtgtctctagatggccagcgtctcattctggccaatgggacactggtgctgcgctctgtc
aaagcggaagattctggttactacacctgcacagccaccaacactctgggctttgacact
atcattgtcaaccttttggttcaagtccctccagaccagcctcgtctaaccgtctccacc
acctccacctcctccatcactctggcctggataccaggagacaacggaggcagctctatc
agaggttttgtgctgcagtactctgttgacaacacggaggaatggaaagatgttttcatc
agttcgagtgaacgatcattcaaattggataacctgcgctgtggtacctggtataaagtg
aagctggctgcaaagaacagtgttggagccggacgcatcagtgagatcattgaggcaaag
acccatgggcgagaaccccagtttaacaaggatcagccggtcttcacccacattaactcc
agccatgcccgcctcaacctgcagggttgggccagtggaggctgtccgatcagcgctgtc
acactagaatttagacccaaaggtacatgggcatggcagactgtacgtaccaatgccacc
acagatgtgttcctggcagagctgcgcgaggccacctggtatgagttaaagatgaaagcc
tgtaacagcgctggctgtggcaaccagagctcccaatttgcaacactggactatgatggt
agcacaattccaccaatcaagtcccccttggaaaagaatgatgatgtcaagaagctgttt
tcgattggctgtccagtcatcttggtcactctgggtgttgcgctgctcttcatcattcgc
aaaaaacgcaaagaaaagaggctgaagagactaagggatgccaaaagcctggcggagatg
ctgatcagtaaaaacaaccgaagctttgacaccccagtgaagggacctcctcagggccca
cggttgcacatcgacatccccagagttcagctgctgattgaggacaaggaaggcatcaag
caaatcggtgaggacaaagccactatccctgtgacagacacagagttcaaccaaactgga
aaccctcagagcttctgcacaggtgtgtccgtccatcaccctgccctcatccagaacaca
ggtcctttgattgacatgtcagacatcagaccaggaactaacccagtgtcaaggaagagt
gttaagtcagcccacagcatcaggaaccgctactccagtcagtggactctgaccaagtgt
caggcctccacgccagctcgcactctcacctcagactggcgcacagttggctcccagcat
ggcatcactgtcacagagagtgacagctatagcgccagcctctcgcaggacacagataag
ggtcgcaacagcatggtgtcgacagagagcgcctcctcaacctacgaggagttggcaaga
gcatatgaacatgccaagctagaggaacacctgcagcatgccaaatttgagattactgag
tgctttatctcagacagctcatctgaccagatgaccactggtaccaatgacaatgccgac
agcatgacgtccatgagcacaccctcagagcccggtatctgccgtttcactgcctcgcca
ccaaaaccccaggattatgatcgtggcaagaatgtagctgtgcccattccacaccgcgcc
aagagtgactattgcaacctaccgctctacatgaagtcagatcctttcttccgaaagcag
tcggagcatcatgacccatgtccagtggttccaccacgtgaggcctctattcgtggcctg
gcccagcgggcataccacacccagggccgtcatgtgactatggactctgcaaagcagcag
gccctaaccatgggccactctggcctgtccagtctcacttcctctggaggagcgacagga
gcctgtggcggaggtagtggaggggtgtctgctagctctagcagctccacccttccccag
aggactcttaccatgccaggctcctctgcttcagcggcccagagtgcagcggcagcagct
gctgctactgctgctgcagctgctgcatcctcatcctctggtgccacaggagggactcct
ggaggtgcctcctcatcctcctccaagatgggaggatccagagactctctcctggagagc
agctcctcgggcttaggcagactacagaagcagagggatgggggggcaggggcctactcc
aagtcatacacactggtgtag
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integrated database retrieval system
