Etheostoma cragini (Arkansas darter): 117942516
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Entry
117942516 CDS
T07493
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04517
IgSF CAM signaling
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117942516
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117942516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117942516
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117942516
Intermediate filaments
Intermediate filament-binding proteins
117942516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
117942516
NCBI-ProteinID:
XP_034723901
LinkDB
All DBs
Position
3:27324563..27409272
Genome browser
AA seq
2704 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
KIVNRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMETEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLQVDDLLQKHSLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLADKRRDELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQESIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVVWLQDAYRLVYSEDFGHDEYSTQSL
LKKHKGVSEAIDKHRLHVVTLRKHMVLLPLRYRDQEEVHVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHL
ATAHPVRAMEVLVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEASIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
QAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSPVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLECQLAYVDHGQDLTTVNKQLKKLHTMESHMEEWYKEVGQLQAQ
VASIPQQTQTKETVAERQAIVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIEDVLERAGIIASIRSPEANCV
RAGHDQLAQLWVLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQKEVVASSPELGQDYEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVQARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQFWKELLTSCEECRVQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARRRSTLECIEMGKTLLAAR
NPAAEEIKERLDKVVAKQYEMSEKWDKHWEFLQQLLEVHQFAQEAVVAEAWLTAQEPFIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKQPPTPLLGRK
VFLDPQDGSPNASTLPRLPISPVMRQTIYEQNEANSPPSPSPATPSPSSVACRLGSTVAN
YTPVMNGSSYRHTLEARHGGVVGVAAGLGQPAPSSIASVATAAMLVSANQVLESASTARD
QATKVMSHLQPVQTARTLEVKSSAYLRQPKIKHLDDAVTPLLVASRLEKARERERGRERE
MMMGEIGTERAEVAVMAEVVLQEPRERLHSEPTRGSRGSRTDLLGPTEPQGHTHHRIERQ
LSSEQLIQARRDELPQEVWREQAERRERRTLERQTSSEQEGHGGHGGHEGRRRERDRHRP
DRQESSEHDTGKEHSDRRSAGGEKRSTMAEIVEQLQEREAAQARGEVPRVPNGVPEKSSR
LERPRARDRPKPRRRPRPKEPGETTRRSRSAPAQSSPAVPQPPTHTAHHEGFLFRKLDIE
TLKKSTNSRSWVNLYCVLKKGEMGFYKDAKNTATSYNNEPLLNLSHCHCDVTNGYKKKKN
VFTLKTKDGSEFLFHAKDEDDLKVWVTNITGSITEHEEIAKWGQPQPTTSSTDEGTRRDG
SKADNRSERGGERSDRADRIERADKEKEKEREKEKERERGERSERSERGGKSDTKRSEKS
AKKK
NT seq
8115 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaagcagctcgggattctgggagacggagtgtaccagctccaagctgttcgag
tgctcccgcatcaaggccctagcagatgaacgagatgcggtgcagaagaaaacctttacc
aagtgggttaactcccatctggccagagtgtcctgtcgcatagcggacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcctacacggggtcgtatgcggattcactgcctggagaatgttgacaaagccctccag
ttcctcaaagaacagagggttcacctggaaaatgttggttcccatgacattgtggatgga
aaccatcgtctgaccttgggccttatgtggaccatcatcctacgcttccagattcaggtg
atcaaaatagagacggaggacaacagagaaactcgctctgccaaggatgccctgctgctc
tggtgccagatgaagacggcagggtaccctgaggtcaacatccagaacttcactacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacagacctgacctgattgag
ttccacaagctgacgcggtccaacgcaactcacaacctccagcaagccttcaacatcgct
gagcagaacctgggcctcaccaaactcctggaccctgaggatgtaaacacagaaaaccca
gatgagaagtccatcatcacttatgtggtctcctactaccactacttctctaagatgaag
gctcttattgtggagggcaagagggttggcaaggtactagacaattgtattgaggcagag
aagatcgtcaaccgctatgaggctctggcgtccgacctgctggactggatagaaaagacc
atcgcggtcattagcaaccagaagtttgccaactcgctgaccggagttcaacagcagctg
caagccttcacaacctactgcaccatagagaagcccatcaagtttcaggagaaggggaat
ctcgaggtccttctgttcaccatccaaagcaagcttagagccaacaaccagaaaccctat
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gctgagcatgagaggggcgtggctctgcgcaaggagctgattcgtcaggagaagttggag
ctgctggctcagtgctttgaccacaaaaccaccatgagacaagcctggctcaatgagaac
cagaggcttgtatctcaggacaattttggctatgacctaccagcagtcgaggcggcaatg
aagaaacacgaggctatcgaggccgacatagcctcatatgaagagcgaattggcgtggtg
gtggaacttgctgcagagatggagacagaaggatactacgacattcggcgtatcttggca
cgtaaggagaacattctgggccagtggagtctgctgaaggagctggtggctgggaggagg
acccgtctggagaagaacttggccctgcagaagacttttcaggacatggtctacatgatc
gactggatggaggacacacaggtccagcttctgtcgaaggactttgggaagcatcttctg
caggtggacgacctgctgcagaaacacagcctgcaggaagccgacattgcagtgcaggct
gagagggtcgagacactcaacaccgctgcactcaaattcaccactatagagggttaccaa
ccgtgtgacccacaggtgatctgtaaccgtgtcaaccatgtctcttcctgtctggaggag
ctgaaacaactggcagataaaaggcgtgatgagcttgaggagtcgagacaactgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagggagaagagctctatcctggga
gctcagggttatgggaaggacctgagcagtgtgctaaagttactacaaaaacacaagact
ctggcaggagaactgctggctcaccggtcactgctgcagaacaccatgaagcgaggaaag
cagatcctgagtgagaagagctttggcactgcggggatccaggagagcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgactcggccacctgcaggag
gcgctgaacttttttcagttctccacggagacagacgacctggtagtatggctacaggat
gcttaccgcctggtctacagcgaagactttggacacgatgagtactccacccagtcactt
ctgaagaaacacaaaggggtcagcgaggccatcgacaaacatcgcctgcatgtagtgaca
ctgcgtaaacatatggtgctgctgcctctgcgctaccgtgaccaggaggaggtgcacgtg
cgtatgggagaggtggagcagctctatactgaagtggccgaggtggcggtgctccgacag
cagtggctccacgacgccctcgctgtctaccgcatgttcagcgaggtcaatgcctgtgag
ctgtggattgatgagaaggagcagtggttggacaagatggagatcccagagagactggag
gacgtggagatggtcgcacacagatttgagagcctggaccaggagatgaacagcctgatg
ggtaggatcctggacgttaaccagatagttcagcagctcctggatggtggtcatccatcc
tctacagaggttagaggttgtcaggaccacctcaactcaaggtggaacagcattgtggag
ctggttgagcagaaaaaagatcagctggactcgatgttacgcctgcaaaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagagaaaagcaattgacgccactcag
tacatgggcagcgacctgggaggagttctggctctgcagagacgcctctccaccatggag
ggagccctgtctgtcctggagcccaaacttctgcatctacaggaagaggcggaacatttg
gccaccgcccacccagttcgggctatggaggttctcgtgccgtttgatggcatcagtgtg
gagtgggaggagctgaaacgcaccctgcaaggctgtgaggactcgctgatggtggctagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggtccagacacaa
acggccgccgcctcagaccagctgcccaacaacttggaagaggcggagaaactcatcaac
aaacatgctgccctaaaggaggagattggacggtatgaagaggactacgagcgcttgcag
gccatgaacgagctgctggagtccgaggaggctcctctccctcaggccgccctgcagcag
tggctccagaagctcgatgttggttggaacaaactgctggagatgtgggagagcaggagg
gaagttctggtccaggctcacattttccatcttttcttgcgagacgtcaaacaggccgag
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggaa
acagtagaagcctccataaagaaacacaaggacttcaccaccaccatggagctgaacctt
cacaggatcaaagctgtgattgaggctggagagagtctgatcagccagagtaacatctac
tctgaccgcatcaaggaacgcatcgacaccctcgccaacaggggaaaccagaacagagag
caggcccagcagtggcttgaaaaactgaacgaccagtgggaacttcagaggtttcttcag
gactgtcatgagctgggggactgggtgtgtgagaagatgctaatggcgagggacagcagc
cgagatgagacccagaaacttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaataaggaatggttggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagcccggtggtccggaggaaactggaggagatcagggagtgttgg
caggacctggagagcaccacacaggccaaagcccgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagagactaggccagctggagtgtcaa
ctagcctacgtggaccatggacaggacctcaccactgtcaacaagcaactgaaaaaacta
cataccatggagagccatatggaggagtggtataaggaggtggggcagctccaggcgcag
gtggcctccatcccacagcagacgcagaccaaggagacggtggcagagcgtcaagccatt
gtggaggccaggatggtgcgtctgatcgagccactgaaggagagacgacgcatcctgctg
gcgtccaaagaagttcaccaagttggacgagacctggaggatgagattttgtgggtccaa
gagcgcctcccaatggccatgtctcaggaacacggctcctctctgcaggcagtccagcag
ctcatgaagaagaaccagacacttcagagagaactgcagggccacaggagcaggatcgag
gatgtcctggagagggcggggatcatcgcttccatacgcagcccagaggccaactgcgtc
agggcgggccacgaccagctggcccagctgtgggttctgctctgggccgagaccgagagg
aggcagctggtcctggatgccatgtaccaggcgcagcagtactattttgacacagccgag
gtggaggcctggttgagcgagcaagagctgcacatgatgaacgaggagaagggcaaggac
gagccgagcacacttcagctgctaaagaaacacttagtcctagaacagaccatcgaggac
tacgctgaaaccatcggcctgctgtcgcagcagtgtcgacagctgctggagatggggcat
cctgactgtgaacagatcagcaagcgtcagtcccagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctt
aacagggaggtggatgagctggagcagtggatcgctcagaaggaggtggtcgccagctcg
cctgaactgggtcaagactatgagcatgtcactgtcctgcaggagaagtttacggagttt
gcgtcagagacaggcagtgtggggcaggagcgagtgacggccgtcaaccagatggtggac
gagctcatcgactatggccactcagaggccgccaccatcgctgaatggaaggacggggtg
aacgaggcctgggccgacctgctggagctaatggagactcgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggttttggcccagatagaggac
aaacatcgaaggctgccagaagttcaggctcggcagggcagcactgccaacaccagcacc
ctgcagagactcctgcacagcttcgaacaggacatacagctgctggtcacgcaagtgcgt
cagttgcaggagagtgctgctcagctaaggacggtgtacgccggtgagaaggccgaagcc
atcgcatgccgcgagcatgaagtgatgcagttctggaaagagctgctgacgtcctgtgag
gagtgtcgagtacagattaccactgagacagacaagctgaggttcttcagcatggtccga
gatcagatcatgtggatggaatcgattatctgtcagatagggacaggagagaagcccagg
gacgtgtcctcagttgaggtgctgatgaattatcaccagagtctgaagagtgaagtggag
gctcgcagacggagcaccctggagtgtatcgagatgggcaaaactttgctggctgctaga
aatccagctgctgaagagatcaaggagagactggacaaggtggttgctaaacaatatgag
atgtctgagaagtgggacaagcactgggaatttctacagcaattgttggaagttcaccag
tttgcccaggaggcggtagtggcagaggcgtggctgaccgctcaggagccgttcatcagc
agcaacgagctgggcgcgagtgtagacgaggtggaacagctgattcgtcggcatgaagcc
ttccgcaaagccgccgccacctgggaagagcgattcagctcactgcgacgactcactaca
gtggaaaagttgaaagcagagcaaagtaaacaacccccgacccctctgctgggtcgtaaa
gtcttcctggacccccaagatggttcacccaatgcatcaaccctcccccgcctcccaatc
tcacccgtcatgagacagaccatctatgagcagaacgaagccaactctcctccctcgccc
tcacccgccacaccttctccttcgtctgtggcttgtcggctggggtcaacagtcgctaac
tacacccctgtgatgaacggctccagctaccgccacaccctggaggcgcggcacggaggc
gtagtgggtgtagctgcaggactaggccagcccgcaccttcctctatcgcctcagttgcc
acggcggccatgttagtctcagccaaccaggtgctagagagtgccagcacagcgagggac
caagcaacaaaagtgatgagtcacctccagccagtgcagacggcgaggacactggaggtg
aaatcctccgcgtacctacggcaaccaaaaatcaaacacttggatgatgcggtgacgccg
ctgcttgtggccagccggctggagaaagcaagggaaagagagagggggagggagagggag
atgatgatgggagagatagggacagaaagagcggaggtggctgtgatggctgaggtggtg
cttcaggagccgagggaacgcctgcacagcgagcccacccgagggtctcggggatccagg
actgacctgttgggccccactgagccccagggccacacccaccacaggatagaacggcag
ctgtccagcgagcagctgatccaggcacgcagggacgagcttcctcaggaggtgtggagg
gaacaggccgagaggcgggagagacggacgctggaaaggcaaacgtccagcgagcaggaa
ggccacgggggccacgggggccatgaggggcggcggagagagagggaccgacaccggccg
gacagacaggaatccagtgagcatgacaccgggaaagagcactcagacagacgctcagct
ggaggagaaaagagatccaccatggcagaaattgtagagcagctgcaagaaagagaagcc
gcacaggcccgtggtgaggttccccgtgtgcctaacggggtaccagagaagtcttcccgt
ctcgaacggcctcgggctcgggacagacccaaaccaaggcgtcgaccacgacccaaagag
ccaggagagactacgcggcggtccaggtctgctccggcccagagcagcccggcagtcccc
cagccgccaacacacaccgcacaccacgagggcttcctcttccgcaagctggacatcgag
accctgaaaaagagcaccaatagcaggtcatgggtcaacctgtactgcgtgctgaaaaag
ggggaaatgggtttctacaaggacgccaagaacaccgccacatcctacaacaacgagcca
ctgctcaacctctcccactgccactgcgacgtcaccaacggctacaagaagaagaagaac
gtcttcacactcaaaacaaaggacggcagtgagtttttgtttcatgcaaaagatgaggac
gacctcaaagtgtgggtgaccaacattaccggcagtattacggagcacgaggagattgcc
aaatggggtcagccccaaccaactacctcatccacagacgagggcacgcggcgcgacggc
agcaaagcggacaacaggtcagagcggggcggcgagcgctcggaccgggccgatcggatc
gagcgggcagataaagaaaaggagaaggagagagaaaaggagaaggagagagagaggggc
gagcggtcggagaggtcagagcggggagggaagtcggacacaaagcgctcggaaaagtcc
gctaagaaaaagtga
DBGET
integrated database retrieval system
