Etheostoma cragini (Arkansas darter): 117942543
Help
Entry
117942543 CDS
T07493
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117942543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117942543
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117942543
Endosome - Golgi transport
Arf GTPase associated proteins
117942543
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117942543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_8
PH_3
PH_6
Motif
Other DBs
NCBI-GeneID:
117942543
NCBI-ProteinID:
XP_034723951
LinkDB
All DBs
Position
3:16684696..16741236
Genome browser
AA seq
1611 aa
AA seq
DB search
MLHSHTSIMSQADSCLTVCDWLCVLRLEQYSEAFRSEGLATLRQCRNLTPDQLERMGITL
PGHQRRILASLNKTHANSDTQSDTHSHLLQSERDQRWDEMGPAKVLERERPVLIPVEEKP
VPKEREKRDGETIRPTPREREKPVPRERHVAMMKEESGEGGEKKPVPGQRKTADRGGKEE
ERDGEIDGEKERPVPKERTRFRSSAPVDCDLSTTSYTSLPPVPPRSTPNCPPQCFTSPLS
PSPPARTPASPKLDRHALPAVNSRSMTHSPTHAPLHPPNVPSVRTRPQTLAIQLPSQPLG
SNRGRQMSPDSPTASHSDDINAPALPPKAGAVPKGPLPIPHRFPAQPPITNSPSPPNTVA
DEMQKDQTPQVPPRIRTPQTQEDTHQSTQPDAQPGLPAWRVTQPPHESRLNSLDYNSDDY
EDPDLFSPSVHQMNTQDREMSLQVPTSLYSDDEHLDEDDPSPWQDEGIDSSQRSFYLPNT
GRLVSATKDDSSQLAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFDNDKEVYSKGI
ISTAFITNVTSVGELKFEVVTNNRTFIFRAESEGERNDWVTVLKDCSRGRHWRSTINPGS
PLTPDYQGYLELRGLRSKLYTVVASDKVFLYKTMEDYRIGVGITSIEMNVGNVKDTDRRG
FDLTTPYRIFSFIAESEQLRVQWVDAMRDAIDEALSNSEVAERIWAEPSNSLCADCDAPK
PEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDKNIWTEELIQVFLLLGNKRVNSFW
AANIPPSEALTSYSCSEERRRFITNKYRQGKYRKYHPLYGNQRELNNALCINVQCSDVLE
TLSLIFCGADVNCPTDIANCPSILSLANAHSQPLQAELIRHNLNTELPRSEVGGGMEAVH
YSPPPCVAYNGFLFKTASMARAITERKAKEEFSRRWCTLNDGTFSYYESDKNSNPNGSLK
ASEIVCLAVNAPEKHGYDSTFELYSESERLYLFGTDDPDSHKEWVKCIAKSLIPATAEPL
LRLAFERIGRLKCKDGLNLQTSKVGWFALVGSTLHAYLEDSQGEEIHLRKLNELSIQQDN
EVLVLVEKGRTLYIEGERKLDFAGWCGAIQAAAGSGGDTLSQQQLTETDIPVIVQSCIGY
ITQCGLTSEGIYRKSGVNSRVAALCERFRRDARSLCLREGEHQVDDVSNTLKRFFRELEM
GLFTAEDACTWLSTAVIQDESKKISQYQLLFKRLPWVNKATLQALINHLYCVQRFSELNQ
MNLHNLAIVFGPTLFQTDGKDFSAGRVVEDLIQHYILIFEVDEQQLTKQLEEITVILKVR
ETLNTKFPSTEPGGHFICTVYLEEKKETAEQHVKIPGSMTAAELTCEVLDRRNILAKDKE
YWNCWEVSDKEEMQRPLHYQERVLPILHSFGTDSHLLIKKHPAMEMMMVYLASKVDASKH
GIMKFREERSILGLGRSSGSFHDRYFILNSSSLRMYKEVRSNRPERDWPVKNLKVYLGIK
KKIRPPTCWGLTVVHESKKQEKPERQQWYLCCETQSEMREWHATFLSIQYDGNVWPQDGL
QQTRVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDSLAVSEPTNHWD
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactcacacacatcaatcatgtcccaggctgattcctgtttgactgtgtgtgac
tggttatgtgttcttcgtctggagcagtattcagaggcatttcggagtgaagggttggca
acgttacgacagtgtcgcaacctcacacctgatcaactggagcggatgggcatcaccctg
ccgggtcaccagagacgcatcctggctagcctgaacaaaacacatgctaacagtgacaca
caatctgacacacactctcaccttctacagtctgagagagatcagagatgggatgaaatg
ggacctgccaaggtgttggagagagagagacctgtgcttattccagtggaagaaaaacct
gtccctaaggagagggagaaaagagacggagagacaattagacctacacccagggaaagg
gagaaaccagttcccagggagagacatgtggccatgatgaaagaggaaagtggagaaggg
ggggagaagaagccagttcctggacaaagaaaaacagcagacaggggagggaaagaggaa
gagagggatggagaaatagatggagagaaggagaggcctgtgcctaaagaaagaactagg
tttcgctctagtgctccagtggactgtgatctcagcacaacttcatacacctctttaccc
cctgttcctccacgaagcacccccaactgccctccacagtgcttcacctctcccctgagc
ccttcacctcctgctcgaacccctgcctcccccaaactggatagacatgcgctcccagct
gtaaatagcagatctatgacccacagccccacacatgcacctctccaccctcccaatgtc
ccatctgtccgaacccggcctcagactttagccattcagctaccttcccaacctttgggt
agtaatcgaggtagacaaatgtcacctgattcccccactgcttcccacagtgatgacata
aatgctccagctctccctccaaaagcaggggcggtacctaaaggccctctaccaatccca
caccggtttcctgcacagcctcccataacaaacagcccttctccccccaacacggttgct
gatgagatgcagaaagaccaaactccacaggtcccacctcgcatcaggacaccccaaact
caagaagacacacatcagtcaactcaacctgacgctcagccgggtctgcctgcatggaga
gtcacccaacctccccatgagtccaggctgaattcactcgattataattcagatgactac
gaggatccagacttgttttcccccagtgttcatcaaatgaacacacaagatagggagatg
tccctgcaagtgcccacttctttgtacagcgatgacgagcacttggatgaggatgatcct
agcccatggcaggatgaaggcattgacagttcgcaaagaagtttctacttgccaaacacc
ggcagactggtttcagccactaaagacgacagttctcagcttgccgctgtcatcaagatg
ggctggctggacaagaatccacctcagggggctctttattatcagagacgatgggtaaag
ctggatgtggactacctgagatactttgacaatgacaaggaggtgtattctaaggggatc
atctctactgccttcatcacaaatgtgaccagtgtgggggagctgaagtttgaggtcgtc
acaaacaaccgaacatttatcttcagggctgaaagtgaaggcgagagaaacgactgggtg
actgtactgaaggactgcagcagggggcgccattggcgcagcaccataaaccccggctca
ccgttgaccccagattatcaaggctatctggagctcagagggttacgctccaaactttat
actgttgttgcctcagataaagtcttcctctacaaaaccatggaggactatcgaatagga
gtgggaatcacatccattgagatgaatgtaggaaatgttaaagacacagatcgccgtggc
tttgatctcaccacaccttaccgcatattcagttttatcgcagagtcagaacaactgcgg
gtgcagtgggtggacgctatgcgggatgcgatagatgaggcgctgtcgaatagcgaggtg
gcagagcggatctgggcggagcctagcaacagcctctgtgccgactgtgatgctcccaag
ccggaatgggctgccatcaacttgtgtgtggtggtctgcaaacgatgtgcaggcgagcac
agaggactgggtccaagcatctcaaaggttcgcagtttgaagatggacaagaatatctgg
acagaggagctcatacaggttttcctgttgctgggcaacaagcgggtaaacagtttttgg
gcagctaacatcccaccaagtgaagctttgacatcctatagctgcagcgaggagcgacgg
cgcttcatcaccaacaaataccgccagggcaaatacaggaagtaccaccctctgtacgga
aaccaaagagagctcaacaatgctctttgtataaatgtgcagtgcagtgatgtgctggag
acgttaagccttattttctgcggtgcagatgttaattgtccaactgatatagcaaattgt
ccctctattctctcgctggccaacgcacattcacaacctttacaggctgagttaattcgc
cacaatctcaacacagagctacctcgatcagaggtgggcggaggcatggaggcggtacat
tactcaccaccaccttgtgtggcttacaatggcttcctgttcaagactgcatccatggct
cgggccatcacagagcgcaaggccaaagaagagttcagtcggcgctggtgcacgctgaat
gatggcaccttcagctactatgagagtgacaagaactcgaaccctaacggatctttgaag
gcttcagaaattgtctgtttggctgtaaacgcgcctgagaaacatgggtatgacagcacc
tttgaactctactcagagtcagagcgtctttatctgtttggcaccgatgacccagacagc
cacaaggaatgggtcaagtgtattgccaagagccttattccagccactgcagagccacta
ctgaggttggcttttgagcggattgggcggctgaagtgtaaagacggcttgaacctgcaa
acatccaaggttggttggtttgctctggtgggctctacacttcacgcctacctggaggac
agccagggagaggaaattcacctccgcaaactaaatgaactctcgattcaacaagacaat
gaggtgctggttctggtggagaagggcagaactctgtacattgaaggcgagaggaagttg
gattttgccggctggtgtggggccatccaggcggcagcagggagtggaggagacacgctg
agccagcagcagctgacagagacagacatacctgtcatagtacagagctgcattggctac
atcacacagtgcggcttgacctctgaggggatatatcgcaagagcggtgtaaactcccgt
gtggcagcgttgtgcgagagatttcgccgtgatgctcgcagtctttgtctgagggaagga
gagcatcaggtggacgacgtctcgaacacactcaaacgcttcttcagggagttagaaatg
ggactgttcactgcagaagatgcctgcacctggcttagtactgctgtcattcaggatgaa
agcaagaaaatatcccagtaccagctgttgttcaagagactgccttgggtaaacaaagct
acactacaagccctaatcaaccacctctattgtgtgcagcgtttttctgagctaaaccag
atgaacctccataacctggctatagtgttcggtcccacactcttccagaccgacgggaag
gacttctctgctggtcgcgtcgtagaggacctcatacagcactacatactcatctttgag
gtggatgagcagcagctaaccaagcagctagaagagatcactgttatcctcaaagtgcga
gagacactcaacacaaagtttcctagtactgaacctggggggcacttcatctgtacagtg
tacctggaggaaaagaaggaaacagcagagcaacatgtcaagatccctggttctatgaca
gcagcagagctgacctgtgaggtcctggatcgacgaaacatcctggctaaagacaaagag
tactggaactgctgggaggtcagcgacaaggaggaaatgcaacgtccactgcactatcag
gagagagtcttacccatccttcactcctttggcacagactcccatctgctcattaagaaa
caccctgctatggagatgatgatggtctacctggccagtaaagtggatgcatctaaacac
ggaataatgaaattcagagaagagcgaagcatcttgggattgggacggtcgtctggaagt
tttcacgaccgatatttcatcctcaattccagctctctcagaatgtacaaggaagtcaga
agtaaccgtccagaacgagattggccagtgaaaaacctaaaggtctatctgggtattaag
aagaaaatccgtcctcctacatgttggggactgacagttgtacatgagagtaagaaacaa
gagaagccagagagacagcagtggtatctctgctgtgaaacccagtcagaaatgagggag
tggcatgctacttttctcagtatccagtatgatggcaacgtgtggcctcaggatggactc
cagcagacacgagtaagccgcgtgttgccagatacgcgtcatggtaatgtgtcactgatt
cctctgcgtggcagtgagaatgagatgcggaacagcgtggcagctttcagccaagactcg
cttgctgtgagtgaacctaccaatcattgggactaa
DBGET
integrated database retrieval system
