KEGG   Etheostoma cragini (Arkansas darter): 117942578
Entry
117942578         CDS       T07493                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117942578 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ecra01009]
    117942578 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117942578 (pnkp)
Enzymes [BR:ecra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     117942578 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     117942578 (pnkp)
Protein phosphatases and associated proteins [BR:ecra01009]
 HAD phosphatases
  Other HAD phosphatases
   117942578 (pnkp)
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117942578 (pnkp)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2 Mmc1_C
Other DBs
NCBI-GeneID: 117942578
NCBI-ProteinID: XP_034724017
LinkDB
Position
3:complement(22241263..22249069)
AA seq 597 aa
MSCTLVSPSGARVPLENGRAVILGRGPDTGVTDKKCSRHQVKVVACFADQDVVVTQLGPN
PSFLDGEKLGRSQSGRLTHGGTLFLVNQSHPFKLFYSLSSNDSTSSPAQKGHKAADKSKG
GRNGKEKEAQSSPELKRSIKDFFSKSPMKSSKRQLSPERENPEGKRQRRDEEASDRQLKE
EEEERIAEERLKQLQELAEKSITQPSSSSSSSKGCLKSSWQQISNLMLYTAAGVKGSDKI
AGFDIDGCIITTKSGKVFPTAPDDWKILYPEIQPRLTNLLKKGYKVVFFTNQMGIAKGKL
RPEVFKSKVEDILNTLQLPVQVFVASGPGIYRKPVMGMWKHLCEKANEGVTVDKTQSFYV
GDAAGRPENWAPGRKKKDFSCSDRLFALNIGLQFHTPEEYFLGWKSAPYSLPNFDPRKID
STGRLYDPPSASLTSSKTEVIVAVGFPASGKSTFFHTHVIPKGYVYVNRDTLGSWQNCVS
ACERALKEGRSVAVDNTNPDPESRKRYVDVAKAAGVPCRCFHFTTSLEHAKHNNKFREMA
PSDSKHAKVNDMIFHSYKKHFVAPALPEGFSEILQIHFVPEFKDSQSETLYRQFSEG
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgtcgtgtacgcttgttagcccctctggagctcgggtccccctggagaacggacgagct
gtgattctgggccggggtccggacacgggggtcaccgacaagaaatgctccaggcaccag
gtgaaggtggtggcttgctttgcagaccaggatgtggttgttactcagctgggtcccaat
cccagtttcctggatggtgagaagctgggccggagccagtctggtagactcacccatgga
ggcaccctcttcctagttaaccagagccacccatttaaactgttctactccctgagctca
aatgattccacctccagccctgcacagaaaggacataaagccgcagataagtcaaaaggc
gggagaaacgggaaagaaaaagaggcacagtcgagtccagaactcaagcgcagtataaag
gatttcttttctaaatctccaatgaagtcatctaaaagacagctgagcccagagagggaa
aacccagaggggaagcgccaacggagagacgaggaggcctccgacagacagctgaaggaa
gaggaggaggaaagaatagcagaggaaaggctcaagcagctacaggagttggcagagaag
tctattacacagccttcgtcatcttcatcctcttcaaagggctgtctaaagagcagctgg
cagcagatcagcaacctgatgctttacactgccgctggtgtcaaggggagtgacaagatt
gctgggtttgacatagatggctgcatcatcactaccaagtctgggaaagtctttcccact
gcgccagatgactggaagattctgtatcctgaaatccagcccaggctgaccaacttgttg
aagaaaggatacaaggtggtgttcttcaccaaccagatggggatcgctaaaggcaaactg
agaccagaagtcttcaagtctaaagtggaggacatcctcaacacactgcagctacctgtg
caggtttttgtagcatccggtcctggtatctacaggaaaccagtgatgggaatgtggaaa
cacttgtgtgagaaggcaaatgagggcgtgactgtggacaagacgcagagtttttatgtt
ggagacgctgcaggtcggccagagaactgggctccagggaggaagaagaaggatttctcc
tgcagtgaccgactgtttgctctgaacattgggttgcagttccacaccccagaggagtac
ttcctaggctggaagagcgccccctacagcctgcctaattttgaccctaggaagattgac
tccactgggagactgtacgacccaccgtctgcctctctcacctctagcaagacagaagtc
attgttgccgtgggtttccctgcatctggtaaatccacattcttccacacccacgtcatt
ccaaaaggctatgtgtacgtcaacagggacacactcggctcatggcagaactgtgtgtca
gcatgtgagcgtgctctgaaagaaggccgcagcgtcgctgtggacaacaccaacccagat
ccagagtctcgcaaacgatatgtagatgtagccaaggcagctggagtgccgtgtcgctgt
ttccacttcacaacctctctggagcatgccaaacacaacaacaaattccgtgagatggct
ccatcagacagcaaacacgccaaggtcaatgacatgattttccacagctacaagaaacac
tttgtggctcctgctcttcctgagggattctccgagatccttcagatccactttgtgccg
gaatttaaagacagccaatcagaaaccctgtaccgacagttttctgagggctga

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