Etheostoma cragini (Arkansas darter): 117942660
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Entry
117942660 CDS
T07493
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117942660 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117942660 (usp48)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117942660 (usp48)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117942660 (usp48)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117942660 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF6276
Motif
Other DBs
NCBI-GeneID:
117942660
NCBI-ProteinID:
XP_034724138
LinkDB
All DBs
Position
4:complement(26901064..26920477)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAPRLQLEKAAWRWVETVKPEEIRLEHIELAYRVNLPACKRATCRRNCKGNPNCLVGIGE
QAWLGDIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
HNSRAQEHNIESDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKSPNLQNVIQRQFCGQFSYVTVCNQCGRSSALPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGENRYFCESCQSKQSATRRIRLHNLPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEGKEDQKCVYELSAVLIHRGISAYSGHYIAHVKDARTG
DWYKFNDEEIEKMEGKKLQLGTEEDIAETVKSQARKPKCSKGYHCSRNAYMLVYKVQEEE
NADPSVTNVEVPAFLQRLVDQDNHKFEEWCCEMADMRKQSVDKGKAKHEEVKELYELLPA
KDGEPYEFIPLDWLKKWLEDSPSTTEIDNSLFLCSHGKLHPDKVADSKRVSLQAAQLLYD
RYSGGPRLDGSSLCRECVSQRCRVLRLKNQLNEDFKEITNLVKRTLSGEGYWVSKSSLRS
WRQLALEQLEEDEHETKHNNGQINGQGPHNNIKEFGSELSEGNEDEMKTFNEDIVCCHGG
LSILETERKLVSSEVWTKLREYFPKAPEFTQIKESCQQCLTLEQEEKDNEAVSKMMALDQ
KNQLLNLFHEKNRPTLAKWPQDTDVLYIVPLYFVDEWRKFIRRPTKSSPVSNVGNTLLLC
PHGGFMFTYDSLINGDAQHVALLWPSEWEVISRLFIVDQPISIHCFKQTTLSDPTPPYTT
QPDLCWECRESFLFQQQRDLREYTQATIYIRKVLEDQRMIKEAAPELNASSSEAEEEKEE
HPKMDGEGDQDFSQSQDGAKRIKLDDSSMASAAVLPVTNMTKLGGIRRSTRHRKLRGEKA
LIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLGVIPESIICLKADE
PIADYDAMDDVYQGECCHIYLQYITLPCSKKIFKVNYDNTVSQLLPSQ
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgtttacagttggagaaagcggcttggcgttgggtggaaactgtaaaacca
gaagaaatcaggctggaacatatcgagctagcatatcgcgtcaatctcccggcctgcaag
agagcaacctgcaggaggaactgtaaagggaatcccaactgtcttgtggggattggtgaa
caggcgtggcttggggatattgatgaaaatgcttttcacaatattgatgacccaaattca
gagcgtcgagacaagaacacatttgttggcttgacaaacctgggtgcaacatgttacgtc
aacacattcctgcaagtttggttccacaacctggagctgcgtaggagtctctatcagtgc
cacaattcccgagcacaggaacacaatattgagtccgattacgagcctcagtccatctgt
gagcatctgcagtatctgtttgcactcctgcagaacagcaacagaaaatacatcgaccct
tcagggctggttaaagcactgggcctggacacaggacagcagcaggatgcccaggagttt
tcaaaacttttcttgtctctattggaggatacgctgtccaagcaaaagagccccaacctg
cagaatgtcatccagcggcaattctgtggacagttctcctatgttactgtatgtaaccag
tgtggacgatcatctgcgctgccgtcccgattctacgagttggagctgaacatccagggt
cataagaacctcacagagtgtgtcacagagttcctgaaggaagagaagctggatggggag
aaccgctacttctgtgagagctgtcagagtaaacagagcgccacccgaaggatcagactg
cacaaccttcctccaaccctcaacctgcagctcatgcgctttgtctttgatagacaaaca
ggccacaagaagaagctcaacacctttatcagttttccagagcagctggatatggggcct
ttcttggaaggaaaagaagaccagaagtgtgtttatgagctgagtgcggtgctcatccat
cggggcatcagtgcctactcgggccactacattgcccatgtgaaggatgctcgcactggc
gactggtacaaattcaatgatgaggaaattgagaaaatggaaggcaagaagctgcagctt
ggcactgaggaggacattgctgagacagtcaagtcccaggcacgaaagccaaagtgcagt
aaaggctaccactgctccaggaatgcctacatgctggtgtataaggtccaggaagaggag
aatgcagatccctctgtgaccaatgtcgaggtaccagccttccttcagaggttggtggac
caagacaaccataagtttgaggagtggtgctgtgagatggccgacatgagaaaacagagt
gtggataagggcaaagccaagcatgaggaggtgaaggagctctacgagcttttacccgca
aaagacggcgagccatatgagtttattcccctggactggttgaaaaagtggctagaggac
tccccttctacaacagagatcgacaactcccttttcctttgttctcacggcaaactgcac
ccagacaaggtggccgactccaagagggtttccctgcaagctgctcagctcctctacgac
cgctacagtggagggccgcgactggacggctcctctctgtgtagagagtgtgttagccaa
cggtgcagagtgctgcggctgaagaaccagctcaacgaagatttcaaagaaatcaccaac
ctcgtcaagcgcacgctcagtggtgagggctactgggtgagcaagtcatctctgcgtagc
tggaggcagttggctttagaacagctagaggaggacgaacatgaaaccaaacacaacaat
ggccagatcaatggacagggaccacacaacaacatcaaagagttcggctcagagctctca
gagggcaacgaggacgagatgaagactttcaacgaagacattgtctgctgtcacgggggt
ctgagtattttggagactgaacggaagctggtttcctctgaagtttggaccaagctgagg
gaatactttcccaaagccccagaattcacccaaatcaaagagtcctgtcagcagtgcctg
acattagagcaggaagaaaaggacaacgaggcagtgagtaagatgatggccctggaccag
aagaaccaactgctcaacctctttcatgaaaagaaccgaccaacactcgccaagtggcct
caggacacagacgttctttacatagtccctctgtattttgtggatgagtggagaaaattc
atcaggaggcctactaaatcctctccggtgtctaacgtgggcaacactctgctactctgt
ccccacggaggcttcatgttcacctatgactccctcatcaacggagatgcacaacatgta
gctctgctctggcccagcgaatgggaagtgatcagcagactcttcattgtggaccaacca
atctccatccactgcttcaaacagaccacactaagtgatcccacccctccatacactact
cagcctgatctgtgttgggagtgcagagagagcttccttttccagcagcagagggatctc
agagagtatacacaagcaaccatctacatccgcaaagtcctcgaagatcagaggatgata
aaagaagcagctccagaactgaacgccagcagctctgaggcagaggaggagaaggaagaa
catccaaaaatggatggagagggcgaccaagacttcagccagtcacaagatggtgcaaag
cggattaagttggatgacagcagcatggcatcagcagctgtacttcctgtgaccaacatg
accaaactaggtggaatcaggagaagcactcgacacaggaaacttcgaggagagaaagca
ctcatcgtttcagctaatcagacacttaaagagctcaaaatacagattatgcacgccttc
tctgtggctccgtttgaccagaacctctccattgacggaaaaagtctgacagatgactcg
gccacactgggtagtctgggcgtcatccccgaaagcattatctgtctaaaggctgatgag
ccaatagcagactatgatgcaatggatgatgtctatcagggtgaatgctgtcatatttac
ctccaatacattacattaccttgttcaaaaaaaatttttaaagtcaattatgataacact
gtttctcaactacttccttcacagtga
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