KEGG   Etheostoma cragini (Arkansas darter): 117942737
Entry
117942737         CDS       T07493                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117942737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecra03021]
    117942737
   03036 Chromosome and associated proteins [BR:ecra03036]
    117942737
Transcription machinery [BR:ecra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117942737
   Coactivators
    SAGA/TFTC/STAGA complex
     117942737
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     117942737
SSDB
Motif
Pfam: TAF4 TAFH
Other DBs
NCBI-GeneID: 117942737
NCBI-ProteinID: XP_034724252
LinkDB
Position
4:complement(6616638..6627765)
AA seq 880 aa
MDASTASTDSTTGHDPGKTLVSGAVTPLPHHQGKQASFSVQTLNGSQTINSHNSGSAAPL
VGATVTSVPSTSISVTAVNSGPVMSKGLTSAQMHPSSNSVIQTSLMNSQSVVASAQSVSQ
ATGPTVTLVRPPMQTAGSGTSLNGNYNVSHPVVSNSTGHTGIDIHTPLVNNSQPSNSLSV
SSSHIIKAEPPITIQSPPPPPPPQPAVTPGAVSAPRILSTVAAGPGGIRAPTPQMLAPRL
PQMSSGQPSVHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTATPTSVPH
GQTPGNTVISRHVAPSTIIHQGCPAPSPSATTTTLHRPPILQSSVGAAVPGITPRTVSQT
AGTTVSSVTVSKETMENVKKCKNFLSTLIKLASTGKQSTETAACVRELVKDLLECRLEAE
EFTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPQPASGPVPSTSPIP
TTVVLGSPAPRLTAPVSRPQLPPGISKPGQTGALVIQLQQQRAMLRPQVALPTTPMVTLR
NQAPGRIMLGQQQLQLKELQPLPVRPEVPHVSKQVSAASLTQAQKNKLKEAGGTFKDDDD
INDVASMAGVNLSEESANILATNSGIVGAVTHSCKDEAFLSYAILQRRMQEIGETLTTLL
KMQHLSIHLLKPQDACVSSPGSRYGVTDLGAEVVNLVSHATQQRLQNLLEKVSEVAQQKN
GNFKEDDKYEQSSDVRAQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLK
QKAKEMQQQELAQMRQREANLTALAAIGPRKKRKILDSPSSSAAAEGSGTGPSLSGGASG
SGSRPTRQRITRVNLRDLLFCLENERFTSHSHFLYKGFLK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggatgcatcgacggccagcacggactccactacgggacacgaccccggcaaaacactt
gttagtggcgctgtaactcctctccctcatcaccaggggaaacaagcctcattctcagtg
cagactttaaatgggagccaaactataaactctcacaattcaggaagcgctgcccctctc
gtgggggcgacggtgacaagtgtcccaagtacttcaatatctgtcacagctgtcaacagt
ggaccagtgatgtcaaaagggctgaccagtgcacaaatgcacccctcgtcaaacagtgta
attcagacttctcttatgaactcgcagagtgttgtcgcttcagctcagtctgtgagccag
gcaacaggacccactgtgacacttgtcaggccgcctatgcaaaccgcgggctcgggcaca
agtttgaatgggaactataatgtgagccatcctgtggtttccaattcaacaggtcacaca
ggtattgacatacacaccccgcttgttaataacagccagccgtccaactcgttgtctgtc
agctcatcacacattatcaaggcagagccacccataacaatacagtcaccaccaccacca
ccaccaccgcagccagcggtcactccgggcgcagtcagcgctccccggattctctcaacg
gtagctgccggtccaggcgggataagagctccgacgcctcagatgttagccccaagactc
ccccagatgtcctcgggacagcccagtgtacataacatccagctccccccgggaatggtg
ctcgtacgcagtgagagcggacagctgctgatgattcctcagcaggctctggcccagatg
caagcccaggctcagggaggcatggcaccacggactgctacaccaacaagtgtgcctcat
ggccagactcctggaaacaccgtcattagcaggcatgtggctcccagcaccattatccat
caaggctgtccagccccatcgccatctgctacgaccaccactcttcatagacctcctatc
cttcagagctcagttggggctgcagtaccaggaattacccccaggactgtcagccaaaca
gctgggaccacagtatcctcagtaaccgtgagcaaagagacaatggagaatgtgaagaaa
tgtaagaacttcctgtctacactgatcaagctagcctccactgggaagcaatctacagag
actgcagcctgtgtgagagagctggtcaaggacctgctggagtgcagactggaagctgaa
gaattcaccagcagattgtacaaagagcttaattcttcaccccaaccttaccttgtgcct
ttcctcaagagaagcctcccagccttgaggcagctcaccccagactctgcagccttcatc
cagcagagtcagctcccccagccagcctcaggtccagtcccctccacctcacccatcccc
accacggtggtcctgggcagcccagcaccccgcctcactgccccagtcagtaggccccag
ctcccacctggcattagcaaaccaggacagaccggcgcactggttatccagcttcagcag
cagagagcaatgttgagacctcaggtagccttaccgacaacccccatggtgactctcaga
aatcaggctcctggtcgcatcatgctggggcagcaacagctccagctaaaagagctgcag
ccacttcctgtgaggccggaggtgccacatgtttctaaacaagtgtctgctgcatccctg
acccaggctcaaaagaacaagctgaaagaggctggtggcactttcaaagatgatgacgac
atcaacgacgtggcctcaatggctggagtgaacttatcagaggaaagcgctaatatccta
gcaactaattctggaatagtgggagcagtgactcattcctgtaaggacgaggctttcctc
tcctatgccattctacagaggagaatgcaggagataggtgagacacttacaactttgttg
aaaatgcagcatctctccatccatctcctaaagccccaagatgcctgtgtttcttctcca
ggtagtaggtatggtgtgacagacctgggtgcagaagtggtgaacctggtctcccacgct
actcagcagcggcttcagaacctgctggagaaagtttctgaagtggctcagcagaaaaat
ggaaatttcaaggaggatgacaaatacgagcagagcagtgatgttcgtgctcagctcaag
ttctttgagcagctggaccagctagaaaaacaacggaaggaggaacaggagagagagatc
ctcctaaaggcagctaagtctcgagctcggcaagaggacccagagcagctgcgtctgaaa
cagaaggcaaaagagatgcagcagcaggagctggctcagatgagacagagggaggccaac
ctgactgctttggcagccattggtcccaggaagaagaggaagattctggactctccgtct
tcctctgctgcagctgagggatcaggaacaggtccctctctgtctggtggggcttctggg
tctggctccagacccacacggcagcgcatcacacgtgtcaatctcagggacctgctcttc
tgtttggagaacgagagatttaccagtcactcccatttcctctacaaaggcttcctcaaa
tag

DBGET integrated database retrieval system