Etheostoma cragini (Arkansas darter): 117942758
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Entry
117942758 CDS
T07493
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117942758 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117942758 (rae1)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117942758 (rae1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117942758 (rae1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117942758 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Nup120_160
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
117942758
NCBI-ProteinID:
XP_034724291
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Position
4:6668523..6675750
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AA seq
369 aa
AA seq
DB search
MSLFGTTSGFGAGGTGVFGNATTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
LQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggactacctctggatttggagcaggagggaccggtgtttttggaaac
gcaacaacagacagccataatcccatgaaggatgttgaagtgacttcacctccagatgac
agcatcagctgcctggctttcagtccccccaccatgccaggaaacttcctcattggagga
tcctgggccaacgatgtccgatgctgggaggttcaggacaatggacagactgtccccaaa
gcccaacagatgcacacaggtccagtgctggatgcatgctggagcgatgatgggagtaaa
gtcttcactgcttcttgtgataaaacagccaagatgtgggatctcaacagcaatcaagca
ttgcagattgcacagcatgacggtccgatcaaatcaatccactggataaaagccccaaac
tacagctgtataatgactggcagttgggacaaaacactgaagttctgggacactcgctct
cccaatcccatgatgtctttgcagatgccagagagatgctattgtgcagatgttgtgtac
cccatggcagtggttgccacagctgagagaggccttatagtgtaccagctggagaaccag
ccctctgaatttcggagaatagactctcctctcaaacatcagcaccgctgtgttgccata
ttcaaggacaagcagaacaagcccactggctttgccctgggaagcatcgaaggccgcgtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtcgaatggaaccaacacaaccactccacaggacatctatgctgtgaatgccatctcc
ttccatcctgtccatggcacactggctactgtgggatcagatgggcgcttcagcttctgg
gacaaagatgcccgcacaaagttgaagacctcagagcagctcgaccagcccattactgct
tgctgcttcaaccacaatggcaacatctttgcatatgcttccagttacgactggtcgaag
ggtcatgagtactacaacccccagaaaaagaactacatcttcttaaggaatgctgcagaa
gaactgaagcctcggaacaagaaatggtga
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integrated database retrieval system
