Etheostoma cragini (Arkansas darter): 117942788
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Entry
117942788 CDS
T07493
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117942788 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117942788 (irf6)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117942788 (irf6)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117942788 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117942788
NCBI-ProteinID:
XP_034724330
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Position
4:complement(12480575..12484635)
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AA seq
487 aa
AA seq
DB search
MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDREAMRFTIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCEIPQPL
SNQGSSDAGSWTPHEEDGGEEDIPDTPESLPPYPSSGTSPSPHIMWSPMTPESSMQPSSC
PPSNGVWPKEERAKIWPKEEPVDVEMHPTPPAPLPDHSMQPPPLPDAMFASPEMWISSLP
MTDLEVQFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPTTEHI
TNDKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPTAPNLIERQRK
VKLFCLESFLSGVITHQRNQTSTPPHFEINLCFGEEWPDGRPKERKLIMVQIVPVVARMI
SEMFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPSSGLNI
VQALQAQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgcctgaagccctggctggtcgctcaggtggacagc
gggcgatacccgggtctggtgtggattgaccgcgaggccatgcgcttcacgatcccatgg
aaacacgctacgcgacacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccggaaagttccaagagggagttgatgaacctgatcctgcaaagtggaaa
gctcagcttagatgtgccctgaacaaaagtcgagaatttaacctggtctatgatggcacc
aaagaggtccctatgaatcctttgaagatatatgatgtctgtgaaatcccacagcccctc
agcaaccaaggctcctcagacgctggttcatggactccgcatgaggaagatggtggtgag
gaagatattccagatacaccagagtctctccctccatacccatccagtggcaccagtccc
tcccctcacattatgtggtctcccatgaccccagagtcctccatgcagccttccagttgt
cccccttctaatggggtctggcccaaagaggagcgtgctaaaatctggcctaaagaggag
cctgtggatgtggagatgcaccccacacctcctgctcctctgcctgatcactcaatgcag
ccccctcctctacccgacgccatgtttgcctctccagaaatgtggatcagttccctccca
atgacggacctggaggtacagttcctgtacagagggaaggagatgtgtcccaccgcgaac
gtcagtaacccgcagggctgcaggctgttctacggagacctcggccccatggtcaaccag
gaggagctgtttgggcccgtgaacctggaacagctgcgctttcccaccacagagcacatt
accaacgacaagcaaaggattttcactaaccgcctgctggacgtgatggacagaggccta
atcctggaggtcagtggtcacgatatctatgcagtgcgtctctgccagtgcaaggtgtac
tggtctggtccttgtgctccaaatccaactgctccaaatcttatagagcgccagaggaag
gtcaaactcttttgcttggagtcttttctcagtggagtgataacccaccagcgtaaccag
acatcaacccctcctcactttgaaatcaacttgtgttttggagaggagtggcctgatggg
aggcccaaagagaggaaacttatcatggttcagattgttccagtggtggcccggatgata
agcgagatgttttctggagacaacacgcgatccttcgacagcggcagtgttcgcctgcag
atctcaattccagatattaaagacaacatagtgacccacctaaagcagctgtactgcctg
ctacagacccaccagggccaggacggctgggcgttacctcccagctcaggcctgaacatc
gtccaggctctgcaggcacagtga
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