Etheostoma cragini (Arkansas darter): 117942800
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Entry
117942800 CDS
T07493
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117942800 (cntn4)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Contactins
117942800 (cntn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
Tissue_fac
C2-set
Pur_ac_phosph_N
C2-set_2
fn3_2
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
117942800
NCBI-ProteinID:
XP_034724367
LinkDB
All DBs
Position
4:complement(4077566..4218083)
Genome browser
AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAVSSVLQSPVFTKQPGSIVYPVETVEKNREVVFSCEAQGSPPP
MYRWKLNGTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPSHSGDLVFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPVPSINWRKVDGVPFPRKVDMRKASGVLEIPYFQQEDAGTYECV
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
EPAEERIQVANGALSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLRS
QTLVKVGGDVLIECKPKMSPWGVISWRKGSEPLQESNRVSILDNGNLRVWNATKSDAGLY
TCVARNQFGVASSTGSITVKEPTAITTLPTTLDITVGESVVLPCQVSHDPSLELKFTWFF
NEQVLHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIHVDEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGH
RMTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVLAFRPHGATGWMQAAVPSAEASRYVFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWNASKKRVL
GYEVRYWRRSEREDTASVQKTVGNQTSTFIHGVKGSTTYYISVRAYNTAGTGPPSNTVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSHPNVMETN
TTSVELALPTDEDYIIQIKPFGEGGEGSSSRQITIPRIPGPNAVASASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagtgagc
agtgtcctgcagagtcctgtcttcaccaagcagcctggcagcatcgtctatcctgtggag
accgtggagaagaacagggaggtggtgttcagctgtgaagcccagggaagcccaccaccc
atgtatcggtggaaactgaatggcacggaaatcagccccaaatctggatctcactacagc
ctttctggaggcaacctcagaatcagccatctgaacaaggaccaagatgctggaacgtat
cagtgcctcgcctccaactcttttgggaccatcgtcagccgagaggccagtctaaccttt
gcatacttggaaaacttcaagactcacagaagaagctctgtgtcggtccgcgaaggccaa
ggagtggttctgctgtgcggtcctccatcgcattccggagatctcgtattttcctggatc
tttaatgagtacccaacatttgtgaagcaggatactcgccgattcatctcacaggagaca
gggaatctgtacatagccaaagtggagccctcagatgttggcaactacacctgtgtggtg
accaacaccgtcacgaagacccgagtccagggtccacccactccgctagtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggttgttcat
gttgccaaaggatccactgtaaagctggaatgctttgctctgggaaacccggtaccatct
ataaactggaggaaagtggacggagtgcccttccccaggaaagtggatatgaggaaagcc
agtggcgtcttggaaatcccatatttccagcaggaggacgcgggcacgtacgagtgtgtg
gcggagaactccaggggaatgaacacagtgaaagggaagctctctttctacgcccctcct
catctcattgagaaaccccaagatgtccagaagctcattgatgactcgttggtgtgggag
tgtaaagccacagggaagccaaagccctcttacaggtggatgaaaaatggcgagaacctg
gagcctgcagaggagcgcatacaggttgccaacggagcgttgtcaatcagtcgtctgacc
ctgtctgacacaggaatgtaccagtgcgtggctgggaataagcacggcgaggtgtactcc
aatgcagagctccgagttatagctgttgccccagatttctctcacaaccaactgaggagc
cagacgctggtgaaggttggaggagatgtgcttattgagtgcaaacccaagatgtcgcct
tggggcgtgatctcttggcgcaagggcagcgaacccctccaagaaagtaacagggtctcc
atcttggacaacggtaaccttcgggtatggaatgcaaccaaatctgatgcaggactttac
acctgtgtggcaagaaaccagtttggcgtggcaagcagcacaggaagcatcacagttaaa
gagccgactgccatcaccaccctgccaaccaccctggacatcaccgtgggggagagtgtg
gtcctgccctgtcaagtgagccacgacccatccctggagctcaagttcacctggttcttc
aacgagcaggtcctccacttcgggagccatggtggattttttgaaaaagtgggaggtcag
cattcggcaggagacattatgattcgtaatatccagctgaggcatgcagggaagtacacg
tgcgccgtgcaaacgaaggtggacagcatttccattgctgtcgacttggttgtcagaggt
cccccggggccccctaccagcatccatgtagacgaaatcactgataccacagcctctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatataccatccaggccagg
acgccattttccctcgggtggcaggctgtcaccacagttcctgaggtggtggggggccac
cggatgacagctacagtaatagacctgagcccttgggttgagtatgagtttcgagtcctg
gccagcaacactatcgggaccggcgagcccagcaagccatctaaacaagcaaggacgaag
ggcacctctccgaaggtcacaccagctaatgtcagtggaggcggtggcagtcgctccgaa
ttagtcatcacatgggagccggttccagaggagctacagaatggaccaggtttcggctac
gttttggcttttcgaccccacggtgccacaggatggatgcaggctgccgtaccgtccgct
gaagcatccagatatgtctttaaaaacgaaagtatccagcccttctctcctttccatgtg
aaggtcggtgtttacaacaatgagggggaggggccgtttggacctgttaccaccatctac
tctgctgaggaagagcctggccgagctcccaccagggtccgtgccaagagcctctccgca
tccgagattgaagtttcatggaaagctttgccctggaatgccagcaaaaaacgagtcctg
ggctatgaggtgaggtactggaggagaagcgaaagggaagacacagccagtgtgcaaaag
actgtaggaaatcaaacatctacttttatccatggggtgaaaggcagcactacgtattac
atctcagtgagggcgtataacactgctggaacggggcctcccagcaacacagtcaacgtt
accaccaagaaaccaccacccagtcagccgccggttaaagtgatgtggaacacatcaaac
tccaagattatattgaactgggagcaggtcaaagctcttgagaatgagtcagaggtcact
ggttacaaagtgctgtataagaagaatcgacacagccaccccaacgtcatggaaaccaac
acaacctctgtagagctcgccctgcccactgatgaggattatatcatccagataaagcca
tttggagaggggggggaaggcagcagtagcaggcagatcaccattccaaggataccaggc
cccaacgcagtcgcctcagcatccaaggtctccactctgtcagccctcagtacaatagca
ctgtctttcacagcgcggacatctttatga
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integrated database retrieval system
