Etheostoma cragini (Arkansas darter): 117942802
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Entry
117942802 CDS
T07493
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117942802 (ap5b1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117942802 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
117942802
NCBI-ProteinID:
XP_034724369
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Position
4:complement(3232664..3238786)
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AA seq
956 aa
AA seq
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MAANWAERVAAFSRSPSRFLSETTAEAFLAQLLRELRDDRASYSVKILLLAPLCEYPTLL
CPSDSVGEETALELMSVFDQCPPKSVQFRCHLLLGLTTVLVCTSCVSGRSCASQDFLDLL
LHIAQDTNDLHGDGALRSLRATACDCLRELEACSPGLLSQRLELLSGLRQRETSQLHQAY
VGLHTLVLRNAVYQLTQETGAGAEQLKALLGGNMSVAWDPELDSGPAQDADPAVLSSLIL
GPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTAPCQAALLHRLTEVVAMVPGVPPAVFR
AQLLRLLGTSEVCLFHTTLLMKCAFTDSLFSAEDEAFILQRLVVLSQHPLLHTPEKLFYM
DCILHFPENRPISCGDGDETLPVLLTPRLASALVPTVFNDSATMLARLNLLSLVYLEEGE
DGDGEGGRGLAYLYEHLTSLLHIVENRGSREIVVTFFRAAFLFLFYFCHVERYFHSTIEK
LSAVYLRHTHLAPHFINLADRTQDKLAESNWAVGFLKALQGVITEAPLAQLTSQDLSRHL
KVLARVAEEGEIPQHSTIRFLSSVITPPSSSLCASGNWRLGNSLLAVCRRLLVHPSLDSL
LMPLADVLQHLASRYRDTDIQDHARLYYTLLTTLSREKLATVLAQGSTDGGQQVKKRSLS
CIMVESEWLTSMLTIHRTEKKIFRLIEADPEPREGAQIDKESDLIQKETETCPGEANAAL
EVYRAQFDVPGFASDITLNYQLTHTGGEASCFDQLFSIRLHFTLTDNHYEQLGDISVPCL
FRERPSPSVRLRLKPRRPYPTTLHASAIFTAQDGLSWLTTLPPIHVAFQQAFMPLPAPPA
WGRSGKLCLFDGLWDEISSKSEEDQADGATSLFCCPLTEAALNALVEEHFLPYLLSDLSD
KEEFKVLFFLPPQSHVLLKIRSEEPVHFNIATDNWQLLSYISSYLLTVTSTQRDTD
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactgggccgagagggtcgctgctttctcccgcagtccgtcccgcttcctc
tccgagacaaccgccgaggctttcctcgctcagctgctccgcgagctccgagatgacaga
gccagttacagtgtcaagatcctcctgttggcccccctgtgtgagtacccgactctgctg
tgtccctcagactcggtgggtgaggagaccgccctggagctcatgtcagtgttcgaccag
tgtccccccaaatcggtccagtttcggtgtcacctcctcctgggcctcaccacagtactc
gtctgcacctcctgcgtgagcggccgctcctgtgcgtcccaagacttcctggacctgctc
ctacacatagcccaggacaccaatgatctccacggcgatggcgctctccgctctttacgg
gccacagcttgtgactgcctgcgggagttggaagcctgctctccaggccttctctcccag
cgcctcgagctcttgagtgggctccggcagcgagaaacatcccagctccaccaggcctac
gtgggactccatactctggtgttgagaaacgccgtgtaccagctcacccaggaaaccgga
gctggtgctgagcaacttaaggctcttctgggaggaaacatgtcagttgcatgggacccg
gagctggactcaggcccggcgcaggacgcagacccagccgtgctgtcttctctcatcctg
ggacccatggggacagtgccaaccctccagactggccccgattgtaaggagttgcgttca
gtcctgtcctccctcctggaggagtcctacctcctcactgctccgtgccaggcggcgctg
ctgcatagactgacagaggtggttgccatggtgcctggtgtccctcccgccgtattcaga
gctcagctactgcgactgctgggcacgagcgaggtttgcctcttccacaccactctgctg
atgaagtgtgcgttcacggacagcctgtttagcgcggaagacgaagcgttcatcctccag
cggctggtcgtgctctcccagcacccattgctacacacacccgagaagcttttctacatg
gactgcatcctgcacttccccgagaatcggccaatcagctgcggcgacggcgacgagacc
ctccctgtgctgctgaccccgcggctcgcctcggctctggtgcccaccgtgttcaacgac
agcgccaccatgctggcccgactcaacctgctgtctctggtctacctggaggagggcgag
gatggggacggcgaggggggcaggggcctggcctacctctacgaacacctcacctcgctg
ctgcacatagtggaaaaccggggcagccgggagatcgttgtcaccttcttcagagccgcc
ttcctcttccttttttacttctgccatgtggagcgctactttcacagcacgatagagaag
ctgagcgcggtctacctccgccacacccacctggcgccacacttcatcaacctggccgac
cggacccaggacaagctcgctgagtccaactgggccgtggggttcctgaaggctctccag
ggagtcatcaccgaggccccactcgcccagctcacctcacaagacctgagccggcacctc
aaggtgctggctcgagtggcagaggaaggagaaatcccccagcacagcaccatccgcttc
ctgtccagcgtcatcactccgccgtcctcgtccctgtgcgcgagtggcaactggcgtctg
ggcaacagcctgctggcggtctgccgccgcctcctcgtccacccgagcctggactcgctg
ctcatgcctctggccgacgtcctgcagcatctcgccagccgctacagggacacagacatc
caggaccacgcccgcctctactacaccctcctgaccacgctgtccagggagaagctggcg
acggttttggcccagggttccaccgacggagggcagcaggtcaagaagcgatcgctgtcc
tgcatcatggttgagagtgagtggctgacgagcatgctgaccattcaccggacagagaaa
aagatattcaggctgatcgaggcggatcctgagccacgagagggagcgcaaattgataaa
gaaagtgacctgatccagaaggagacggagacctgtccaggagaggccaacgcagcactg
gaagtatacagagctcagttcgacgttcctggctttgcctcagatatcaccttgaactac
cagctgactcatacgggaggcgaggcctcctgctttgatcagctcttcagcatccgcctc
cacttcaccctcacagacaaccactacgaacagctgggcgacatcagcgtcccgtgtctg
ttcagagagaggccgtcgccaagcgtccggctgagactgaagccccggcggccctacccc
accaccctccacgccagtgccatcttcaccgcccaggacggcctctcctggctcaccacc
ctgccacccatccacgttgctttccagcaggccttcatgcctctgcccgctcccccggcc
tgggggagaagtggcaaactgtgcttgtttgacggtttatgggatgaaataagctccaaa
agcgaagaggaccaggccgacggcgccaccagcctgttctgctgcccgctgacggaggca
gctctgaacgccttggtggaggaacacttcctcccttaccttttatcagatctgtctgat
aaagaagagttcaaagtgcttttcttcctcccgccacagtctcacgtgctgctgaagatc
aggtcggaggagcctgtgcacttcaacatcgccacagacaactggcagcttctgagctac
ataagttcttatctactgacagtcacgtccacacagcgagacactgactga
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