Etheostoma cragini (Arkansas darter): 117942862
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Entry
117942862 CDS
T07493
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117942862 (magi1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
HTH_65
Motif
Other DBs
NCBI-GeneID:
117942862
NCBI-ProteinID:
XP_034724444
LinkDB
All DBs
Position
4:7753552..7888429
Genome browser
AA seq
1701 aa
AA seq
DB search
MSKPVLKKNHWTFRVNECSVSKDARGDLNVPLRGGAENGEFAYIGQVNEDVVVYKIGKLN
EGELLLEVENLSISGLPLYDVHTVIKNCKGPVRLKTVRQGSKLNKDLKHYLSQRFQKSSP
DHDLQQTIRDNLYRHAVPCTTRTPREGEVSGVDYNFLSVEDFLKLEKSGTLLEIGTYDGN
YYGTPKPPVQPPGGKVISSSGGDAPLSDGLSGCLPGSQNSTPRRAKSYNDMQNAGIGPGE
QQQVDDEDLPDMNSSFTGDSSEFDEIQPFAPHKSDPPYVGRTPSPSATTESTQQSHSHLS
HPPPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCMDKPQKPLEECEDDEGVH
TEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPMLEAKRRRQLEQQQPQPQSQQ
PPEGERYIREWIEDSVLAGAPLASYAANQETYRDPQRGPPVPNAMGQKRGKPFFTRNRSE
LKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDT
CVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAILENKEPIIVN
GQEASNSYDSPSSHGSQNTNNGSTNGGAPINGLPRPHSPSAEVASDTSSQHGYPSDVVTL
ASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLKEGDIIVEVNK
RNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLDGFEQSPPYRDYTRRQLSR
KDSQSSSQHSVSSHRSTHTDSPVHTSLAPPLSESIAPPPPSQPLPGLPPQDSPADGTIQR
KPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGA
ADEDGRLRSGDELVCVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTNYTVKAEGDV
PPSPASSHHSSTQAPSLMEEMGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGAGGSGN
AVVAVAVATTSSQPPNVISNAPSALQPYDVEIRRGENEGFGFVIVSSVSRPEAGTTFAGN
ACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLR
IIPGDESSNASLLTNAEKIATITTTHTPQQQAAPEARNNTKPKQESFEFKAPQGPPPQPP
TQVSAQDSEFYSVDLDRDNKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNGNMRVGDEIL
EINGESTKGMKHARAIELIKSGGRRVHLVLKRGDGSVPEYDGSPNDISPANPASGLQNAA
EVSTLPPTNTPSESNYPPEPQQPSRSKKEPTRHSTGTGKHHHSNHRSPNKRTSTGRHRGK
TSTEKAVSKKDVRGRDGHRHHSSGHHHSRHRSPNKGHGRSRSAENTLDSRHRGHRNGRSP
DRSKGHSSTHRHHRSPYRSPHPHRSPRPSRHHSPARRHAHSPEPYRRYASPERQGHSNEK
PNGGSAVLKEPPKTSEFSFPLEDSVLREPPALDRLNREATLPPLLREERLYGEDSLLLKA
SSMDKAYRGDRLLMDLASRGQRDAFRDNTLPRVRTPDSDSGYKRYSSLLRGRSPERTEKD
GRYASRGSTPEPQYRARSLGRDISPLRSFRRDDSEDEEDDDIFVAAKVREYYSTLKSNTS
RSSALPEPKRTYKDSPKDLSI
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccgtgctaaagaaaaaccactggaccttcagagtgaacgaatgttccgtc
tctaaagatgcccgtggcgacttgaatgtgccactgcgcggcggagcggagaacggggag
ttcgcctacatcgggcaagttaacgaggatgtcgtggtttacaaaattggaaaactaaat
gaaggagaactgctgctagaggtggagaatctctctatttcaggattacccttgtacgac
gtacacacagtgataaagaactgcaaaggtcccgtcaggttgaaaactgtcaggcaagga
agtaagctgaacaaggacctgaagcattatctgagccagcgcttccagaaatcctcgcct
gaccacgatctgcaacagactatccgagacaacctctaccgtcacgccgtgccttgtaca
acccgtaccccacgtgaaggtgaagtttctggcgtggactacaacttcctctcagtggag
gacttcctgaagttggagaagagtgggaccctgttggagataggaacgtatgacggtaac
tattatgggacacccaagccaccggtgcagccccccggtgggaaagtgattagcagtagc
ggcggtgatgccccactgtcagacgggctcagcggttgcctgccgggctcgcagaactct
actcccagacgcgccaagtcctacaatgacatgcaaaatgctggaatagggcctggagag
cagcagcaggtggacgacgaggaccttcctgacatgaacagtagctttacaggagattct
agtgaattcgacgaaattcaacccttcgccccccacaagagtgacccgccctacgttggg
agaaccccctcaccatcggccaccacggagagcactcagcagtcacactctcacctgagc
catcctccccccgaggacccgctgggacctctgcctgacaactgggagatggcctacacc
gagaacggagaggtctactttatagaccacaatacaaagaccacctcctggatagaccct
cggtgcatggacaagccacagaaacccctggaagaatgtgaagacgatgaaggggtacac
acggaggagctggacaatgacctcgaacttccaccaggatgggagaaaatagacgatcca
gtgtatggggtctactatgttgatcatatcaacaggaagacccagtatgagaatccaatg
ttggaggctaagaggcgcaggcagctggaacagcagcagcctcagccccaaagccagcag
ccacctgaaggtgagcgctacatccgagaatggatcgaggactctgtgttagcaggggcc
ccactggccagctatgctgccaaccaggagacctacagggatcctcagagaggtcctcca
gtgcccaacgcaatggggcaaaaacgggggaagcctttctttactcggaaccgatctgag
ctgaaagggactttcattaataccaagctgaaaaagagtcgtcgggggttcggtttcact
gttgttggaggcgacgagccagacgagttcctgcagatcaagagcctggtcctggatgga
cctgctgccctcgatggcaaaatggagacaggtgatgtgatcgtgagcgtcaacgataca
tgtgtgctaggatacacgcatgcccaagttgtaaagatcttccagtccatcccaattggc
tctatggtcaacttggagttgtgccgtggctacccactgccctttgaccccgatgaccca
aacactagccttgtaacctcagtggccattcttgaaaacaaggagcccatcattgtcaac
ggccaggaagcctccaacagctacgactcgccgtccagccacggcagtcagaacaccaac
aacggctcgaccaacggaggagcacccatcaacggcctaccccgaccccacagcccctct
gcagaggtggcctccgatacctcttcccagcacggctaccccagtgacgtggtcaccctg
gcctcatctattgcaacacaaccggagctcatcactgtacacatggagaaaggggataag
ggcttcggcttcaccatcgccgacagtcctggaggtggagggcagagagtgaagcagatt
gtcgactacccacgctgccgcggcctcaaagaaggtgacatcatcgtggaggtgaacaag
agaaatgtacagagcatgtcccacaaccaggtggtcgacctcctcagcaagtgtcccaaa
ggcagcgaggtcaccatgctggtgcagagaggtgtggcacctgcaaagaagagcccaaaa
ctggatggttttgagcagtctcctccatacagagattacactaggaggcaattgtcgaga
aaggacagccagagcagctcccagcatagcgtttccagccaccggagcacccacacagac
tctcctgtgcacacgtccctggcaccccctctcagtgagagcatcgctcccccacccccc
tctcagcccctgccaggcctgccgccccaggactccccagcagacgggaccatccaaaga
aaaccggacccctttaagatctgggcccagtccaggagcatgtatgaaagtaggcttcca
gacttccaggagcaggacatttttctgtggaggaaagacacaggttttggcttcaggatc
ctaggaggcaacgagccaggagagccgatctacattggccacatagtgaagtatggtgca
gcagacgaggacggacgcctgcggtccggggatgaactggtatgcgtggacggcacagca
gtggtgggcaagtcccaccaacttgtagtgcaactgatgcaacaggctgccaagcagggc
cacgtcaacctcactgtgcgacgcaaaaccaactacaccgttaaagccgagggagacgtg
cccccatcgccggcgtcctcccaccacagcagcacccaggcgcccagcttgatggaggag
atggggaagcgcaccccacagggcagccaaaactccctaaatactgtgagctctggcagc
ggctccacctccggcatcggcagcgggggagggggtggaggggcaggaggcagcggtaac
gctgtggtcgctgtggcagtcgccaccacctcctctcagccccccaacgtcatctccaac
gccccctccgccttgcagccctatgacgtagagatccgccgcggcgagaacgaaggattc
ggtttcgtcattgtctcttcggtgtcacggcctgaagctggcaccactttcgctggaaat
gcatgtgtggccatgccccacaaaatagggcgcatcatcgaagggagcccagcagaccgc
tgcgggaagctgaaagttggcgaccgcatcctagctgtgaacgggtgctccatcaccaac
aagtcccactccgacatcgtcaacctcatcaaggaggccgggaacaccgtcacactacgc
atcattcctggagacgagtcatcaaatgcatctttgttgaccaatgcggagaagatcgcc
actataaccaccactcacacacctcagcaacaggctgcacctgaggctaggaacaacacc
aaaccaaaacaggaatcctttgaatttaaagcaccacaaggccctcctccccaaccccct
acacaagtctcagctcaggattctgagttctactcagtagacctggaccgagacaacaaa
ggctttggcttcagcctgcggggaggcagagaatacaacatggatctgtacgtgctgagg
ctagctgaggacggagcggccgtccgcaacggaaatatgagggtcggcgatgaaatcttg
gagatcaacggcgagagcaccaagggcatgaagcatgcacgagccatcgagctcatcaag
agtggaggccggcgtgtccatctggtgctgaagaggggtgatggctctgtgcctgaatat
gacggcagccccaacgacatcagcccagccaacccagcctcagggttacaaaacgctgcg
gaagtgagcaccctgccccccaccaacacgccatcggaatcaaactacccaccggaaccc
caacaaccatcccggagcaagaaggagccaacccgccactctaccggcactggcaagcac
caccattccaaccaccgctcccccaacaagagaaccagcacgggaagacacagggggaag
acgtccacggagaaggctgtgtccaagaaggatgtcagaggaagggacggccaccgccac
cattctagcgggcaccaccatagccgccaccgttcacctaacaaggggcacggccggtcg
cgcagtgcagaaaacaccctggatagccgccacaggggacaccgcaatggccgctccccg
gacagaagcaaaggtcactcctccacacatcgccaccaccggtccccataccgctcgcca
cacccgcataggtccccccgcccctctcggcaccactcccctgccagacgccacgcccat
tcaccagagccctaccgccggtacgcctccccagagagacagggccacagcaacgagaag
cccaacgggggcagtgctgtattgaaggagccacccaagacttctgaattcagcttccct
cttgaggacagcgtcctccgcgagcccccagccctggaccgcctgaacagagaggccacg
ctaccaccgctgctcagggaggagcgcctgtacggggaggacagcctgcttttgaaagcc
tcctccatggataaagcctacaggggggacagactgttaatggatttggcatcccgtggc
cagagagacgccttcagggacaacaccttgcccagagtgcgcacccccgactcagattca
ggctacaagaggtacagctcgctgctgagggggcgctcacctgagaggacggagaaggat
gggcgctacgccagccgaggcagtacccccgagccgcaataccgagctcgcagcctggga
cgagacatctccccattgaggagtttcagaagggacgactcggaggacgaagaggatgat
gacatttttgtggcggctaaggtgagagagtactacagcacgctcaagagcaacaccagt
cgctcatctgccctccctgagcccaagaggacctacaaggacagccccaaagacctgagc
atctga
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integrated database retrieval system
