Etheostoma cragini (Arkansas darter): 117942877
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Entry
117942877 CDS
T07493
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117942877 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117942877 (nelfcd)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117942877 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
117942877
NCBI-ProteinID:
XP_034724524
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All DBs
Position
4:complement(11894726..11901263)
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AA seq
578 aa
AA seq
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MDEEYYSGGGDWEGTGEGPIEYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKTYFQS
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGENDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacagtggcggtggagactgggaaggcacgggggagggtcccatt
gagtatgtggaaggagaaaatgatgggaaaatccaggaagattgtcttcagaaattctca
agcagggattacatcatggagcctgccatcttcaacaccctgaaaacgtatttccaatca
ggtggctccccagaacacgtcatccagcttctctctgaaaactactctgctgtggctcag
actgttaatttactggcagagtggctcatccagatgggtgtagagcctgctcaggtccaa
gagcgagtagaaaatcacctcaagagtctcctgattaaacactttgacccccaaaaagcc
gattccattttcactgttgagggagagacccctgcttggctcgaacagatgatagcacac
actacgtggagagatcttttctataaactggcagaggctcacccagactgcctgatgctc
aacttcactgtgaagctcatttcagacgcaggttatcagggtgagatcaccagtgtgtcc
acagcatgtcagcagctggaagttttctcccgggtgttgaggacatctttggccacgctg
ctggatggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtctgt
catggcgagcacacctacctctttgcccaggcgatgatgtccatcctgtctcaggaggaa
cagggcggttcagctgttcgtaggatcggccaggaggtgcagaagtcagcgcacgagaga
ggtcacgatgccagtcagataaccctcgcgctcggcacagcagccgcctaccctcgagcc
tgccaggcgctaggtgccatgttgtctaaaggagccctgaatcctgcagatatcacagtt
ctcttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcctgcc
tttctggacctgttcatgcagtcactgtttaagcccggatcaaagattaaccaagaccat
aaacacaaatacatccacatcttggcctatgctgccagtgtggttgaaacatggaaaaag
aacaagagagtcaacatcaacaaagatgagctgaaatcaacctccaaggccatagagact
gtgcacaacctgtgctgcaatgagaacaaaggagccacagagctagtggctgaacttggc
actttgtaccagtgcattcggtttccagtagttgctatgggggtgttgaaatgggtggac
tggacagtgtctgagccacggtacttccagctgcagacagaccacacaccggtgcatcta
gctttactggacgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccagctg
ctcatcaagctatttgagacagagcactctcagctggacgtcatggagcagctggagttg
aagaagactctgctggaccgaatggttcatctgctgagccgtggctacgtcctacctgtt
gttggttacattcgcaagtgtctggagaaactcaacacagacatctccctcattagatat
tttgtcactgaggtgctggatgtgatcgcgcctccctacacatctgactttgttcagctt
ttcctgcccatcctcgagaacgacagcatcgccggaacgatccgcacagagggagaaaat
gaccccgttgcagagttcattgctcattgcaagtcaaacttcatcatgataaactga
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