Etheostoma cragini (Arkansas darter): 117942912
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Entry
117942912 CDS
T07493
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117942912 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117942912 (lrrn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_9
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
LSR
Ig_6
Sp38
Ig_C17orf99
Peptidase_M73
Baculo_ODV-E27
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117942912
NCBI-ProteinID:
XP_034724607
LinkDB
All DBs
Position
4:5375527..5388462
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AA seq
717 aa
AA seq
DB search
MARRRLDGLPLGQVYAGLMLVLIGLSFVQSNECPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYIAKTDDELEQLFNLTELDLSQNNFSSIRDVGLTNMS
QLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINTISANAFSGLHDLLRLHLNSNKL
KTINSQWFESTPNLEILMIGENPVVGIMDFNFKPLGNLRSLVLAGMDLTDIPGNAFVGLD
NLESLSFYDNKLVQVPQRAFQKLPNLKFLDLNKNPLHKIQTGDFKNMLRLKELGINNMGE
LVSIDQYALDNLPELTKLEATNNPKFSYINRQAFRDVPALESLMLNNNALNALYQSTVDS
LPNLREISIHSNPLRCDCVIQWMSSNKTSVRFMEPPSMFCALPTEVKGLQVREVLQNNLA
NQCLPLISHDTFPSHLNLDIGMTLDLDCRAMSQPEPEIYWVTPMGNKVMMDTISEKYSLT
SEGTLRISHIQVEDSGRYTCVAQNSEGADTRVTAIRVNGTLLDSTQLMKIYVKQTESHSI
LVSWKINSNVMTSNLKWSSATMKIDNPHITYKARVPVDVHEYNLTHLQPATEYEVCLSVS
NIHRQTQKSCVNVTTKQATFAVEISDQGTNTALAAVMGTMFAIISLASLGVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKEGSSETKPSQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggaggttagacggcttacctctaggccaggtctatgcaggcctgatgctg
gtattgataggactatccttcgtccagagcaatgagtgccctcagctgtgtgtatgcgag
atccggccatggttcacccctcagtccacctacagagaagccatcactgtggactgcaat
gaccttcgcttaacacgcatcccgggaaacctctccagtgacactcaggttctcctccta
cagagcaactacattgccaaaaccgatgacgagctagagcaactcttcaacctgactgag
ctagatttgtcccagaacaacttcagtagcattcgagatgttggccttaccaatatgtcc
cagctcaccacacttcatctggaggagaatcagatcacagaaatgccagattactgtctg
caggaccttagcaacctgcaggagctctacatcaaccacaatcagatcaacaccatctct
gccaatgccttctctggtctccacgacctgctcaggcttcacctaaactccaacaagctc
aagaccatcaatagccagtggtttgaatctacgcccaacctagagatcctcatgattggg
gaaaaccctgttgttggaataatggacttcaatttcaagccattgggcaaccttagaagc
ctggttttggctgggatggatctgacagacatccctggaaatgcctttgttggacttgac
aatcttgagagcctctctttctatgacaataagctggtccaagttcctcaaagagccttt
cagaaactgcctaacctaaagttcttggatttgaacaaaaaccctctgcacaagattcag
acaggagatttcaagaacatgctgagactgaaggagctgggtataaacaacatgggtgag
ctggtttctattgaccagtacgctctggacaatcttcctgagctcacaaagctggaggcg
acaaacaaccccaagttctcttacattaaccgtcaggcctttcgtgatgtcccagccttg
gaaagtctaatgctgaacaacaatgccctgaatgccctgtatcaatccacagtagactct
ctgcccaacttgcgtgagatcagcatccacagcaatcctctgcgttgtgactgtgtcata
cagtggatgagctccaacaaaaccagtgtccgtttcatggaacctccatccatgttttgt
gccctgccaacagaagtaaagggtttgcaagtgcgggaggtgctacagaataatttagca
aaccagtgcctgcctctgatttcccatgatactttcccaagccacctcaaccttgacatt
ggcatgaccttggacttggactgcagagccatgtcccagcctgagcctgaaatctactgg
gtgacaccaatggggaacaaggtaatgatggacaccatatctgagaagtacagccttacc
agtgaagggacattgagaatttcccatatccaagtagaagactctggtagatacacttgt
gtggctcaaaattcagagggagctgacacaagagtgacagctatacgggtgaatggcact
ctgttagacagcactcagctaatgaagatctacgtcaaacaaactgaatctcactctatc
ctggtctcctggaaaataaactccaatgtaatgacctctaacctcaagtggtcatctgcc
accatgaaaatagacaacccacatattacctacaaagccagggtacctgttgatgtccat
gagtacaaccttacacatttacaaccagcaactgagtatgaggtatgcctcagcgtctcc
aacatccaccgacaaacacagaagtcgtgcgtgaatgtgacgacgaagcaagcaaccttc
gctgtggaaatatctgaccaagggaccaacactgctcttgcagcagtcatgggaacgatg
tttgcaatcatcagtctggcctctttaggtgtgtatattgccaagagatggaagaggaaa
aactatcaccattctctgaaaaaatacatgcagaaaacctcatcaataccgcttaacgag
ttgtaccctcctcttatcaacttgtgggaagcagacagtgaaaaggagaaagagggctca
tccgagaccaaacccagtcaggtggacaccacacgcagctattacatgtggtga
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