KEGG   Etheostoma cragini (Arkansas darter): 117942929
Entry
117942929         CDS       T07493                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04137  Mitophagy - animal
ecra04140  Autophagy - animal
ecra04144  Endocytosis
ecra04145  Phagosome
ecra04148  Efferocytosis
ecra05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117942929 (si:dkey-13a21.4)
   04145 Phagosome
    117942929 (si:dkey-13a21.4)
   04140 Autophagy - animal
    117942929 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    117942929 (si:dkey-13a21.4)
   04148 Efferocytosis
    117942929 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117942929 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecra04131]
    117942929 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117942929 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:ecra04031]
    117942929 (si:dkey-13a21.4)
Membrane trafficking [BR:ecra04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    117942929 (si:dkey-13a21.4)
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117942929 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   117942929 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   117942929 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   117942929 (si:dkey-13a21.4)
GTP-binding proteins [BR:ecra04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    117942929 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA Septin IIGP AAA_24 AAA_22 AAA_5 AAA_7 AAA_16 AIG1 GTP_EFTU AAA_29 MCM AAA_33 FeoB_N
Other DBs
NCBI-GeneID: 117942929
NCBI-ProteinID: XP_034724641
LinkDB
Position
4:complement(5902363..5905825)
AA seq 204 aa
MNDRKSPVTLKIILIGNSGVGKSSFMNRYVNHRFTNMYRATIGTDFLSRTVNVGEDTVTL
QIWDTAGTERFQSLGTPLYRGAHCCMLVFDVTCRASFSALEEWRKEFLIQGEPQDPSDFP
FIVLGNKTDLSNREVSGRKALQWCEEIGAEYFEGSAKDDLHVEKPFSRAAQSGLQQYKKH
TLENTGHFQITCKQPRETRNTCEC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaacgacagaaaaagtccggttacactgaaaataatcctcataggaaactccggggtg
ggaaagtcctccttcatgaacagatatgtaaaccaccgcttcaccaacatgtaccgggcc
acgatagggactgacttcctctccagaacagtcaacgtaggggaagacacggtcaccctg
cagatctgggacacggcgggtacagagaggttccagtccctgggtacacctctgtacaga
ggagctcactgctgcatgctggtatttgatgtcacgtgcagagctagtttctctgctctg
gaggagtggaggaaggagtttctgatccagggcgagcctcaggacccatccgacttccct
ttcattgtgctgggcaacaagactgacctgagcaaccgggaggtgtctggcaggaaggcc
ttacagtggtgtgaggaaataggagcagaatactttgaaggaagcgcaaaagatgatcta
catgtggaaaagccattctcgagagcggctcagagcggcttgcaacagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcaaacagccgagagaaactcgcaac
acttgtgagtgctga

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