Etheostoma cragini (Arkansas darter): 117942954
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Entry
117942954 CDS
T07493
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117942954 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117942954 (thoc7)
03041 Spliceosome [BR:
ecra03041
]
117942954 (thoc7)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117942954 (thoc7)
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117942954 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Herpes_pp85
Sec8_N
Zw10_N
OSTMP1
Peptidase_S10
Suppressor_APC
OVT1
DASH_Dad2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
117942954
NCBI-ProteinID:
XP_034724671
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All DBs
Position
4:8112528..8116034
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AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSVTKWCNSTGTPEEGFTQYQRMMGTLSQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQSITSAHEKIAECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQLLSRTKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDDINQESPAGNGE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgttacagatgatgaagttattcggaaacgtctccttattgacggggacgga
gctggagatgaccgccgaatcaacgtgctgcttaagagtgtcaccaaatggtgcaactcg
actgggaccccagaggaagggttcacacagtatcaaaggatgatgggcacattgtctcag
tgtgaattctccatggggaagacgttgatggtttatgacatgaatctgcgtgaaatggag
aattatgagaaaatctacactaacatagaacaaagcatcacgtctgcacacgagaagata
gcagaatgcaaaaaagaaattcagcgagcaaaaagaatacggaagaatcggcaagagtac
gatgctttagctaaggttatccagcagcacccagaccgacatgaaacgctaaagcaattg
gaggcgcttgacaaagaactccagttactgtctcgcaccaaggagaatgtagatgcaaag
ttggaattaagaaagaagcagttccatgtgctactcagcaccatacaggaactacagcag
acactcgagaatgatgagaaatcagacaatgatgacatcaatcaagagagccctgcaggg
aatggggaatga
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