Etheostoma cragini (Arkansas darter): 117943038
Help
Entry
117943038 CDS
T07493
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
KO
K16482
centriolar protein POC1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117943038 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117943038 (poc1a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117943038 (poc1a)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117943038 (poc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
eIF2A
Beta-prop_HPS5
RMC1_N
Ge1_WD40
Beta-prop_NWD2_C
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_DCAF12
Nucleoporin_N
Frtz
Motif
Other DBs
NCBI-GeneID:
117943038
NCBI-ProteinID:
XP_034724819
LinkDB
All DBs
Position
4:complement(18256384..18289565)
Genome browser
AA seq
458 aa
AA seq
DB search
MTSAPSDPTLERHFKGHRDTVTTVDFSCNMKQIATGSMDSCVMIWNMKPQMRAYRFDGHK
DAVLSVQFSPSGHLLASASRDKTVRLWVPSMKAESTSFRAHTATVRSVNFSGDGQNLITA
SDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDDRLIVSSSDDKTIKLWDKNSRECIH
SFYEHAGYANHVDFHPSGTCIAAASTDNSVKVWDIRSHKMLQHYQVHSGVVNSLFFHPAG
NFLITASNDSTMKILDLVEGKLLYTLHGHQGPVNCVAFSRTGEYFASGGSDEQVMVWKSN
FDCAEGNDGVRLQHKSNFSLQALPASSTAHPSHPSALRSRASEPTEHFTGQDSHTAAHTQ
SASRSGSHSKASSSSTQQSQTQDLPQHSSQVQAQSQFADGGVPPGLASTLEHIIGQLDIL
TQTVSILEQRLTLTEDKLKECLENQMEIGLHLQRQEEA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgcaccgtctgatccaactctagagagacatttcaagggtcacagggacact
gttacaactgtggacttcagctgcaacatgaaacagatcgccacaggatcgatggactcc
tgtgtgatgatctggaacatgaaacctcagatgcgagcgtatcgttttgatggacataaa
gatgctgtcctttctgttcagttttctccctctggccacctgttggcctcggcctccaga
gacaagacggtacggctttgggtgcccagcatgaaggcggagtcaacatctttcagggct
cacacggctactgtgcgcagcgtgaacttttccggtgacggacagaatctgatcacagcc
tctgacgacaagaccatcaaagtgtggaccgtccacaggcaaaagtttctcttctctctc
aaccagcacatcaactgggtccgctgtgccaagttttctccagatgaccgcttgattgtg
tcgtccagtgatgataagactataaagctgtgggacaagaatagcagagagtgtattcat
tctttctatgaacatgctggttatgcaaaccatgtggacttccatcccagtggaacatgc
atcgctgcagcgagtactgacaactctgtcaaggtgtgggacatcagatcccataagatg
ctacagcactaccaagtccacagtggtgtggtgaacagcttgtttttccacccggctggt
aatttcctcatcactgcatccaacgattccacaatgaagatactggaccttgtagagggc
aagctactgtatacactgcacggacaccagggtccagtgaactgtgtggccttctccagg
accggagagtactttgcctctggaggttctgatgagcaggtaatggtttggaagagtaac
tttgactgtgctgaaggcaatgatggcgtcaggctgcagcataaatctaatttcagcctg
caggcactaccagccagctccacggcacacccctcgcatccatctgcactccgcagccgg
gcttctgaaccaacagaacattttaccggacaggactcccacactgctgcccacactcag
agcgccagtcgcagtggcagccacagcaaagcaagttcctcctctacccagcagtcacag
acccaggatttaccacagcattcatcccaagttcaagcacagtctcagtttgcagatgga
ggggtcccccctggtctagccagcacactggagcacatcataggtcaactggatattctc
actcagacagtttcaatcttggagcagcggctgacgctaaccgaggacaagctcaaggag
tgtttggagaaccaaatggagatcggtctacatctccagagacaagaggaggcctga
DBGET
integrated database retrieval system
