KEGG   Etheostoma cragini (Arkansas darter): 117943060
Entry
117943060         CDS       T07493                                 
Name
(RefSeq) laminin subunit beta-3-like
  KO
K06244  laminin, beta 3
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04382  Cornified envelope formation
ecra04510  Focal adhesion
ecra04512  ECM-receptor interaction
ecra04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117943060
   04518 Integrin signaling
    117943060
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117943060
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117943060
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 CCDC171 CCDC39 DUF8042 CLIP1 DUF1664 CEP135_TSGA10_CC F5_F8_type_C DUF5847 ATG17_like Tropomyosin
Other DBs
NCBI-GeneID: 117943060
NCBI-ProteinID: XP_034724846
LinkDB
Position
4:complement(23981358..24006319)
AA seq 1164 aa
MRTLLLLAAIAAVSQAQTDCSQGACYPPISDLLLGRGQQLHASSTCGLAGSEVYCTPYEQ
RRMKCCPCDSRNPYGQLAHTVQDVLSTSGPDRWWQSVKEVNYVTLQLDLGSLFQLDNLVL
DFKGPRPSSFLIERTQDNGRTWEPSLYLATDCHKSFPGIPTTTPLTLDQTYCFTLPPTGA
NAYQDHKIQFDPLRQYAYVPASKNQKIEDVSAVTGLRVRLMELGDVPRLPGRALSRFYAL
KEMRVMGRCMCHGHANRCLPEADNNLLTNSIQVNPQCDCQHNTVGDNCERCADLYNDLPW
RPAEEGNTHTCKRCECNNHAQRCRFDQSVFEASGRRSGGVCEGCLHHTTGPKCDQCAPGY
QPNPRSRMDRPDACIRCVCSAEGTVNGGRCDDSSGACQCKVNVEGPRCERCKRGYYDLSA
SNPLGCSKCSCSPDGSLSDDCDVISGQCACRTHFHGRTCEVCSKGYWKPALTSFCKPCGC
DPTRSYSDTCDQVTGQCQCRPGFGGPTCSECPDNTYGDPLTGCRLCRCDAEGTLPGGCDK
QTGACLCRPGVTGTRCDSCSRGHCDSFPGCKTCPSCFFTLDAQRQNLSAALERLSPRFPS
RPGGAGDPGNFVPRILILENSLNLIRDSISLPLGITTQVDKALLQLDKLRNQVDRVNSDL
PPLTPTPGLDSELDRLQALLDSLSLVYKAKKDAKDNFSNQNNAGAFSAIKTAYDESTDAA
KNVNASGDVVKESADARGETKDLQNQVQPANTRDLDKLNQSMASRPDLTPVAKQVCGSVR
SEPCTPLQCEGGALCPPDRTPPCAKGEKCVGALPLSKRADADVKDVKERLDKLTGKITEA
AEKLQETQDATNQVRESAEKLSNRMKQAQDELEVDLKETRDVVKDLKDFLSDPSSNLTHI
QEVSDWILKAKLPLSLAALKRKLEDLKNLAANLPDSTAVLNQAEPQLEKARKLLQEAQDA
RDTALGVKADVDGLLEGFSSVEGSLSDLEDKLQDSMDLIDNVSNSLTKVKEQLIPAEKAL
DDASALIKPMKPQLDKLNNLLQNGGQQAQDAQDNADKAEDEAAAANEDLLSLEKQLELLK
EKDVASEGAGPLGDRLVKLQQDAGALANTTDNMMEALEGKADSIKGLQDEILVKSKLLEG
LDAKLKDILGKLRKKAQDLSTCQG
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgagaacacttttactcctagcagccatagctgcagtctcccaggcccagaccgactgc
tctcagggggcttgttacccacccataagtgacctgctcctgggaaggggccagcagctc
cacgcctcctccacctgtggcctcgctggttccgaggtctactgcaccccatacgaacag
aggaggatgaagtgttgtccatgtgactccaggaacccatacggtcagctggcccacact
gtccaggatgtcctgtccacatctggaccagacagatggtggcagtcagtgaaagaggtg
aattatgtcactctccagttggacctgggcagcctgttccagttggacaacctggtgctc
gacttcaagggtccgcgtcccagttcctttcttatagagaggacacaggataatggcagg
acgtgggagccctctctctacttggctacagactgtcacaagtctttccctggcatcccc
acaactacgcctctcaccctggaccagacgtactgcttcacactgccccccactggagcc
aacgcataccaagatcacaaaatccagtttgatcctttgcgtcagtatgcttacgtgcct
gcttccaaaaaccaaaagattgaagatgtgtctgcggtgacggggctgagggtgagactg
atggagctcggcgacgtgccgcgtctgccaggcagagcgctcagtaggttctacgccctg
aaggagatgagggtgatgggccgctgtatgtgccacggacacgccaaccgatgcctgcca
gaggccgacaacaacctgctgaccaacagcatacaggtgaatcctcagtgtgactgccag
cacaacacagtcggagacaactgtgagcgttgtgctgatctctacaacgacctgccctgg
agacctgcagaggagggcaacactcacacctgcaaacgctgtgagtgtaacaaccacgcc
cagcgctgtcggtttgaccagtcggtgttcgaggccagtgggcggaggagtggaggtgtg
tgtgagggttgcctgcaccacaccacagggccaaagtgtgaccagtgtgccccgggctac
cagccaaaccctcgcagccgaatggaccgccccgatgcctgcatacgctgtgtctgcagt
gccgaggggacagtaaacgggggccggtgtgacgacagcagcggcgcgtgtcagtgtaag
gtgaacgtggaaggcccccgctgtgagcgctgtaagagaggctactacgacctgagcgcc
tccaaccctctgggctgctccaagtgttcctgttccccagacgggtccctgtcagatgac
tgtgacgtgatcagcggccagtgtgcctgtcggacccacttccacggtcggacctgtgaa
gtgtgttccaaaggctactggaaaccagcgctgacttcattctgcaaaccctgcggctgt
gaccccaccaggtcatacagtgatacttgtgaccaggtgacaggtcagtgtcagtgcaga
cccggctttggaggcccaacatgtagcgagtgcccagacaacacatacggagaccccctc
acaggctgccgattgtgtcgctgtgatgctgaaggaacacttccaggcggttgtgacaag
cagacgggggcctgtttgtgtcggcccggcgtcacaggaacccgctgtgactcctgcagc
cgaggacactgtgactccttccctggctgcaagacatgtccgtcctgcttcttcaccctg
gacgcccagagacagaacctcagtgcagctctggagagactctcccccagatttccttcc
cgtcctggaggggctggtgatcctggaaattttgtacctcgcatcctcatcctggagaac
agcctgaacctgatccgggactccatctccctccccctcggtattaccacacaggtcgat
aaggctctgctccaactggacaagctcaggaaccaggtggacagggttaacagtgacctt
ccacccctgacaccaactcctggtctggactcggagcttgacagactccaggctctcctg
gacagcctcagtctggtgtacaaagccaagaaagatgcaaaggacaactttagcaatcag
aacaacgcaggagcattttctgccatcaagaccgcgtacgacgagtccacagacgcagcg
aagaatgtaaacgccagcggagatgtggtgaaggagtcagctgatgccaggggagagacc
aaggaccttcaaaaccaagtccagccagccaacaccagagacctggacaaactgaaccag
agcatggcctcccgacccgacctcacgcctgttgccaaacaggtatgtggcagtgttcgc
tcagagccctgcacccctctccagtgtgagggtggagcgttgtgcccccccgacagaacc
ccaccttgtgcaaagggggagaaatgtgtgggcgccctgcctctgagcaagagggcagac
gccgatgttaaggatgtgaaagagcgactagacaagctgactgggaagatcacagaggca
gcagagaagctccaggaaacacaggatgcaaccaatcaggtgagagagtccgcagagaag
ctgtccaataggatgaagcaggcccaagacgagctagaagtcgacttgaaagagacgcgt
gacgtcgtgaaagacctcaaagatttcctgtcagacccgtcctccaacctgacccacatc
caggaggtgagcgactggatcctgaaagccaaactgcctctcagcctggccgctctgaag
aggaagctggaggatctgaagaatctagcggccaatctcccagacagcacggccgtgttg
aatcaggccgagccgcagctggaaaaagccaggaaactgctgcaggaagcgcaggacgcc
agggatacggccctgggagtaaaggccgacgtggacgggttgctggaaggcttcagctca
gtggagggctccctctcggacctggaggacaaactgcaggacagcatggatctcatagac
aacgtgagcaacagcctgacaaaggtcaaagagcagctgatcccagcggagaaggctctg
gatgatgcatcggcactcataaagccaatgaagccccaactggacaagctcaataatctg
ctgcagaacggaggccagcaggcccaggatgcacaggacaacgcagacaaagctgaggat
gaagcagctgctgccaatgaggacttgttgtctctggagaagcagctagagcttcttaaa
gagaaggacgtggccagtgaaggggcggggccgctgggggaccgactggtgaagctgcag
caggacgccggagcgcttgccaacaccactgacaacatgatggaggctctggaaggtaaa
gcagattccatcaaggggctgcaggacgagatcttagtgaagtccaaactgcttgaagga
cttgatgctaagcttaaggacattttgggaaaacttcgaaagaaagcccaggacctcagc
acctgccagggctga

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