Etheostoma cragini (Arkansas darter): 117943144
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Entry
117943144 CDS
T07493
Symbol
tnfrsf1b
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04060
Cytokine-cytokine receptor interaction
ecra04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117943144 (tnfrsf1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117943144 (tnfrsf1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ecra04050
]
117943144 (tnfrsf1b)
04090 CD molecules [BR:
ecra04090
]
117943144 (tnfrsf1b)
Cytokine receptors [BR:
ecra04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117943144 (tnfrsf1b)
CD molecules [BR:
ecra04090
]
Proteins
117943144 (tnfrsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
EVI2B
C1orf162
Syndecan
DUF6112
Chordopox_A13L
DUF8777
Motif
Other DBs
NCBI-GeneID:
117943144
NCBI-ProteinID:
XP_034724983
LinkDB
All DBs
Position
4:complement(17200468..17207683)
Genome browser
AA seq
492 aa
AA seq
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MKDILVLLVLLNAKTTKVCSQPYKADSDGNCLNSTTEYLLDGSELCCKKCPPGQRLKQKC
SETTETVCEPCSTDQYMENWNYAPNCFSCTKCKTNAGLQIGQSCSSTTMSRCVCQPGMYC
HMGFDDPYCSLCRRYSACKTGDGVSVPGTKNLDVICERCPNGTFSDSRSSTDPCRPHTNC
HGRAVVVKGDATSDTVCEPEPQTSTKEPHAEIVFTTSNTVMSTVLATSDSKAPRGPTYST
LSISLSVSEPVFNYSTKNPPPSTVSDSTLAAVIAGVLLFILFIAIILLVLYKSVWKKDAA
RFHPKVDANGNCEGGDKINQGYLVETQLTSFTETSTEQQCLLQNGKACSGHSQYCNNTET
LAQTDGCRSQNSIGPLQSTVALHNPHSALSEPRPLLSNSEPATPQPSVTTQSSSQPTSPQ
VLSPVTTSPHVNVNITFNINGSCGTPSVTPTDLIHVDSKLPFGEEDRSFSIPQQEAGKQS
LMSVQESESYSA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatacttgtactgctggttctgctgaatgccaaaactaccaaggtctgttct
cagccctataaggcagactcagatggaaactgtctcaactccacaacagagtacctgtta
gatggttctgagttgtgctgcaagaaatgtccccctggacagcggctgaaacaaaaatgc
tctgaaactactgagactgtgtgtgaaccatgctcaacagaccagtacatggaaaactgg
aactacgctccaaactgcttctcctgtaccaaatgcaaaacaaacgcaggtctgcagatt
ggccagagctgctcctctaccacaatgtccaggtgtgtgtgccagcccgggatgtattgt
cacatgggctttgatgacccatactgctcactatgtagaaggtacagtgcttgcaaaact
ggtgatggagtgtctgtgccaggaacaaaaaacttagacgtgatctgtgaacggtgcccc
aatggaacgttctctgactcacgctcctccacggacccctgtcggcctcatacaaactgt
catgggagggctgttgttgtaaaaggtgacgctacctcggacacagtgtgtgaacctgag
cctcaaacctcaacaaaagagcctcacgctgagattgtgtttacaacttcaaatacagtg
atgagcacagtattagcaacctcagactccaaggctccacgtggaccaacatactccaca
ttgtctatcagcctgtctgtttcagagccagtattcaactattcaacaaaaaacccgcca
ccaagcacagtatctgacagtacactggctgcagtcattgccggtgtccttttgttcatt
cttttcatcgcaatcattctgctggtcctttataaatcagtctggaagaaagatgctgca
agatttcatcctaaagtagatgcaaatggaaattgtgagggtggtgataaaatcaatcag
ggttatttggtggaaacgcagctgacgtccttcacagaaacctcaacagaacaacagtgt
ctgctgcagaatgggaaagcctgcagtggccacagtcagtactgtaacaatactgaaact
ttagcccaaacagacggctgcagaagccagaattccatcggccctttgcaatccaccgta
gctcttcacaatcctcactctgctctgtcggagcccaggcctttactttccaactcagag
ccagccaccccccagcccagcgttaccacacagtcctcctctcagcccaccagcccacag
gtcctcagtccagtgaccaccagtccccacgttaacgtcaacatcactttcaatattaac
gggtcttgtgggacaccttctgtcacgcccacagatttgattcatgttgactctaaactc
ccctttggagaggaagataggtcctttagcattccacagcaagaagccggaaaacaatca
ctgatgtcagtacaggagagtgaaagttacagtgcatga
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