Etheostoma cragini (Arkansas darter): 117943214
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Entry
117943214 CDS
T07493
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117943214 (rrp9)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
Other 90S particles
117943214 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
LAIKA
VGLL4
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
117943214
NCBI-ProteinID:
XP_034725083
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Position
4:16013021..16019078
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AA seq
486 aa
AA seq
DB search
MSSPFFMKKKEKPKFAIKGKNTAVLKRKADGDSGGKSKLRAKKPNSKHNEEISSDSETES
PVVPRKRQSNEEVDYEETPQEKKLRLAKLYLDQLKEEEEDKAEEDSFETDLIAGRLQEDV
LEQKGKLQRLIAKDLMPPDASEIRVLRGHKLPITCLVISSDDKFIFSAAKDCSIIKWDVV
AGKKLHTIPGGRKGTEDRHVGHTGHILCMAISSDGKYLATGDVNKLIMIWEAETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENVYVETLFGHQDAITGLDSLSREC
CVTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLCTVKQAHGRHGDAGLEQPYWVASVAALQNSDTVASGASGCSHNSQVQVWKCGQNYRGL
QPLFSVPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPPNPE
EAKMTE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcctttctttatgaagaaaaaagaaaaacccaaatttgccataaaggggaaa
aatacagcagtgctgaaacgaaaggctgatggggactctggtggaaagagcaaactacga
gccaagaaacccaactccaaacacaacgaagagatttccagcgactctgagacagagagt
cctgtagtgcccagaaaaagacagtccaatgaagaggttgattatgaggaaactccacag
gagaagaagctgagattagccaaactttaccttgaccagctaaaggaagaagaggaagat
aaagcagaagaagactcatttgagactgatctgattgctggaagacttcaagaagatgtg
cttgaacaaaaaggaaagcttcagcggcttattgccaaagatctcatgccgccggatgct
tcagaaatcagggtgttaagaggacacaaacttccaattacctgtcttgtcatcagctct
gatgacaagttcatcttttctgctgccaaagactgctccatcattaagtgggatgttgta
gctgggaagaaactgcacacaatacctggcggaaggaaaggtacagaggatcggcatgtt
ggtcatacaggccatattctgtgtatggccatatcatcagatggaaaatacttggccacc
ggagacgtgaacaaactgatcatgatctgggaggcagaaacatgtaaacatctatacaaa
ttcacaggacacaaagggcctgtttcaggtctttcgttcaggaagggaactcatgatctg
tacagcgcctctcatgatcgctcaataaaggtgtggaatgtggacgagaatgtgtatgtg
gaaactctctttgggcatcaggacgccatcacaggactggacagtctgagccgtgagtgc
tgtgtgaccgccggaggaagagatcgctccgtgcgggtgtggaagatagccgaggaatct
cagctggtgttccacggccacgagggttcaatcgattgtatccagctcataaacgaggag
cacatgataacaggagctgatgatggttctgtgtctctgtggagtgtcaacaagaagaag
cctctctgcacagtaaagcaggctcacggtcgccatggtgatgcagggctggagcagcct
tattgggtcgcctcggtagcagcgcttcagaactctgatacagtcgcctcaggtgcctct
ggctgttcacacaactcacaggtacaggtgtggaagtgtggccagaattaccgtgggctg
cagcctctattcagtgtgcctgtgtccggtttcatcaacagtctgaagttttcaagctcc
ggtcagttcttggtagctggagttggacaggagcacaggctgggtcgatggtggcgacta
aaagaggccaagaatgggatctatgttattcctcttaaaaggaaacctccaaatccagag
gaagccaagatgactgaatag
DBGET
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