KEGG   Etheostoma cragini (Arkansas darter): 117943214
Entry
117943214         CDS       T07493                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecra03009]
    117943214 (rrp9)
Ribosome biogenesis [BR:ecra03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117943214 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 CFAP251_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_TEP1_C DSE1_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ASA1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_HPS5 PAC11 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_ACSF4 LAIKA Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 117943214
NCBI-ProteinID: XP_034725083
LinkDB
Position
4:16013021..16019078
AA seq 486 aa
MSSPFFMKKKEKPKFAIKGKNTAVLKRKADGDSGGKSKLRAKKPNSKHNEEISSDSETES
PVVPRKRQSNEEVDYEETPQEKKLRLAKLYLDQLKEEEEDKAEEDSFETDLIAGRLQEDV
LEQKGKLQRLIAKDLMPPDASEIRVLRGHKLPITCLVISSDDKFIFSAAKDCSIIKWDVV
AGKKLHTIPGGRKGTEDRHVGHTGHILCMAISSDGKYLATGDVNKLIMIWEAETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENVYVETLFGHQDAITGLDSLSREC
CVTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLCTVKQAHGRHGDAGLEQPYWVASVAALQNSDTVASGASGCSHNSQVQVWKCGQNYRGL
QPLFSVPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPPNPE
EAKMTE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtcttcgcctttctttatgaagaaaaaagaaaaacccaaatttgccataaaggggaaa
aatacagcagtgctgaaacgaaaggctgatggggactctggtggaaagagcaaactacga
gccaagaaacccaactccaaacacaacgaagagatttccagcgactctgagacagagagt
cctgtagtgcccagaaaaagacagtccaatgaagaggttgattatgaggaaactccacag
gagaagaagctgagattagccaaactttaccttgaccagctaaaggaagaagaggaagat
aaagcagaagaagactcatttgagactgatctgattgctggaagacttcaagaagatgtg
cttgaacaaaaaggaaagcttcagcggcttattgccaaagatctcatgccgccggatgct
tcagaaatcagggtgttaagaggacacaaacttccaattacctgtcttgtcatcagctct
gatgacaagttcatcttttctgctgccaaagactgctccatcattaagtgggatgttgta
gctgggaagaaactgcacacaatacctggcggaaggaaaggtacagaggatcggcatgtt
ggtcatacaggccatattctgtgtatggccatatcatcagatggaaaatacttggccacc
ggagacgtgaacaaactgatcatgatctgggaggcagaaacatgtaaacatctatacaaa
ttcacaggacacaaagggcctgtttcaggtctttcgttcaggaagggaactcatgatctg
tacagcgcctctcatgatcgctcaataaaggtgtggaatgtggacgagaatgtgtatgtg
gaaactctctttgggcatcaggacgccatcacaggactggacagtctgagccgtgagtgc
tgtgtgaccgccggaggaagagatcgctccgtgcgggtgtggaagatagccgaggaatct
cagctggtgttccacggccacgagggttcaatcgattgtatccagctcataaacgaggag
cacatgataacaggagctgatgatggttctgtgtctctgtggagtgtcaacaagaagaag
cctctctgcacagtaaagcaggctcacggtcgccatggtgatgcagggctggagcagcct
tattgggtcgcctcggtagcagcgcttcagaactctgatacagtcgcctcaggtgcctct
ggctgttcacacaactcacaggtacaggtgtggaagtgtggccagaattaccgtgggctg
cagcctctattcagtgtgcctgtgtccggtttcatcaacagtctgaagttttcaagctcc
ggtcagttcttggtagctggagttggacaggagcacaggctgggtcgatggtggcgacta
aaagaggccaagaatgggatctatgttattcctcttaaaaggaaacctccaaatccagag
gaagccaagatgactgaatag

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