Etheostoma cragini (Arkansas darter): 117943318
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Entry
117943318 CDS
T07493
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117943318
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
117943318
NCBI-ProteinID:
XP_034725275
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Position
4:11008804..11022786
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AA seq
810 aa
AA seq
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MISVSCILALGLFSSAMGTDFYEGEDLSDLKRLQREFGSYDERHSLVKSELSKRSAGLNE
QTCTALLGVESTLQNNTHSFTFKVRTMGSLSLAWVGDGSGVLLVLTTFQVPLFMMRFGQS
NLYRSEDYGKTFKDVTHLINHTFIQSEFGIAISPDHSGKVMLTADVSEIGGFKLFRSQDF
GMTYVPTDLPFEPLIQMLYNPGDSNVLLTLSITLDLWLSEDFGATWRKIHDSVCLVRWGP
KDNIYFTTNYNGSCNDKGMLELRKTADYGRSFQTIASRVYSFVLGGRFVFASIMTGTGTE
RVIHVSVDGGEVWNMAQLPPVNHEQFYSILAANQDMIFMHVDNPGDSGAGTIYVSDDRGA
VFSKSLERHLYTTTGTDTDFTAVTSLRGVYMTSVLTHDGAVETVITFDQGAKWQTLHKPQ
NSHCDAETSTNRPNRCRLHIHASYSTTMKMNVPMLPLSQPNAVGLILAHGSVGDTESALS
PDVYVSDDGGYSWLLALRGPHHYAILDSGGLLVAVEHTNSPVNQMKFSTDEGQCWHTYNF
TSEPLHFSGMDSEPGSRSMNVSLWGYRNDFSKWVVITIDFRNLLTRDCTEGDYIQWLAHS
ANPSGSIDGCVLGYKETFLRLRKDSVCLNGRDFAVTKKLSPCPCTVDDYHCDFGYYRPEN
SSECVEQKEMKGHPLEFCFNGTIEQLQTSGYRKIPGDQCEGGFQPDRKETDLRRMCTSNA
LYPISLTENSSSNTAVIVMVVIAMLLTSAVAGIWLVKKYVCGGRFLVHRYSVMREHVEAV
KIEGVDDLDTHYMETGKAQYNEDSDQDLLE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgtatcttgcattttggcgctcgggttgttttcgtctgcgatgggcacagac
ttctacgagggagaagacctctccgatttgaagaggctgcagagggagtttggcagttac
gatgagcgacatagtttagtaaagtcggagctctcgaaacgcagcgcagggctgaatgaa
cagacatgtacagctctgcttggagtagagtcaaccctgcaaaacaacacccattctttc
accttcaaagtgaggaccatgggttcactgtcactggcctgggtgggagatggatctggg
gtgctgctggtgttgacaacatttcaggtgccgttgttcatgatgcgttttggccagtct
aacctctataggagtgaagactatggcaagacgtttaaagatgtgacccacctgatcaac
cacaccttcatccagagtgagtttggcattgccatcagtcccgaccactctggcaaggtg
atgctcactgctgatgtgtcagaaatcggggggtttaaactgtttcgctcgcaggacttt
ggtatgacctatgttccaaccgacctgccatttgagcccctcattcagatgctgtacaac
cccggagactctaacgtactgctgacgctcagtatcacgttggacctgtggctgtctgag
gactttggtgccacctggaggaagatccatgacagtgtttgtttggtcagatggggtcca
aaagacaatatctactttacaacaaactacaatggatcatgcaatgataaaggaatgttg
gagttaaggaagacagcagactatggtcgaagtttccagaccatcgcatcgagagtttac
tcatttgtactgggcgggcgctttgtttttgcctccatcatgactggcacgggtacagag
cgtgtgatccacgtgtcagtggatggaggtgaggtgtggaacatggctcagcttcctcca
gtcaaccacgagcagttctactccatattggccgccaatcaggacatgatattcatgcat
gtggacaaccctggagactccggtgctggaaccatctatgtgtcagatgacagaggagcc
gtgttctccaagtctctggagcgccatctttacacgaccacaggaaccgacactgacttt
actgccgtaacttcactcaggggcgtctacatgaccagcgtactcacacacgatggtgca
gtggagacggtgatcacctttgaccaaggagcaaaatggcagacgctacacaaaccacag
aacagccactgtgacgctgagacctctaccaacaggcctaacagatgcagacttcacatt
cacgcctcctacagcacaaccatgaagatgaacgttcccatgctgcctctttcacagccc
aatgctgtgggcctcattctggctcatggcagcgttggagacacagagtcagctctgtcc
cctgatgtgtacgtgtctgatgacgggggctactcgtggttgttggctctcaggggcccc
catcattatgctatactggactctggagggctgctggtggctgtggagcacaccaactca
cctgtcaaccagatgaagttttcaacagatgaggggcagtgctggcatacgtataacttc
accagcgaaccccttcacttcagcggtatggacagtgagcccggctctcgctctatgaac
gtcagcttgtggggctacaggaacgacttcagtaaatgggttgtgatcaccatagacttc
aggaacctcctgaccagagactgtactgaaggggactatatacaatggctggctcactct
gcaaaccccagtggatctatagatggttgtgtgctgggctataaagagaccttcttacgc
ctgaggaaagactctgtctgtttgaacgggagggactttgccgtcaccaagaagctgtcc
ccctgtccatgtacagttgacgattaccactgtgactttggatattaccggccagagaac
agctcagagtgtgtggagcagaaggagatgaagggtcatcctctggagttctgttttaat
gggaccatcgaacagctacagaccagcggctaccggaagattccaggagaccagtgtgag
ggaggttttcagccagacaggaaggagacagacctgaggcgaatgtgcaccagcaacgcc
ctttatccaatttctctgactgaaaatagttcatcgaacacggctgtcatagtaatggtt
gtcatagcgatgcttctgacgagtgctgttgcgggcatttggctggttaagaagtatgtc
tgcggaggacggttccttgtgcaccgatactctgttatgagggaacatgttgaggctgtt
aaaatagaaggagtcgatgaccttgacactcactacatggagacaggaaaagcacagtac
aatgaagactcagatcaggacctcttagaatag
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