Etheostoma cragini (Arkansas darter): 117943396
Help
Entry
117943396 CDS
T07493
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00260
Glycine, serine and threonine metabolism
ecra00630
Glyoxylate and dicarboxylate metabolism
ecra00670
One carbon pool by folate
ecra01100
Metabolic pathways
ecra01200
Carbon metabolism
ecra01230
Biosynthesis of amino acids
ecra01240
Biosynthesis of cofactors
ecra04981
Folate transport and metabolism
Module
ecra_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117943396 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117943396 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117943396 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117943396 (shmt2)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117943396 (shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DHX37_C
Motif
Other DBs
NCBI-GeneID:
117943396
NCBI-ProteinID:
XP_034725387
LinkDB
All DBs
Position
4:19213217..19236661
Genome browser
AA seq
501 aa
AA seq
DB search
MLSFALRQLTRPLCQRASVRLGVRGQQSHAANQTVDEDRPWTGQESLAQDDPEMWDLLLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEILYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYIDQVLRNAKSMAT
ALLNKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETMARMA
NLRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgccctgagacaactcacacggccactgtgccagcgagcctcagttcgt
ctcggtgtacgtggccagcagtcccacgctgccaaccagacagtggatgaagatcgtccg
tggacgggccaggagagcctggctcaggacgaccctgagatgtgggatctgctgctaaag
gagaaggacaggcagtgccgcggcttggagctcattgcatctgagaatttctgcagtcga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccaggg
agaagatactatggtggagcagaagtggtcgaccaaattgagcttctgtgtcagaaacga
gccttggaggcctttgacttggacccagctctgtggggtgttaacgtccagccgtactct
ggctcacccgctaactttgctgtctacaccgccgtgctcaacccccatgaccgcattatg
ggcctggacctgcccgatggaggacatctgacccatggctacatgtccgatgtgaagagg
atctccgcaacctcaatctattttgagtccatgccttacaagctaaatactgcaacagga
ctcatagactatgaccagatggagatgacggccaagctgttccggcccaagctcatcatc
gctggcaccagtgcctatgcccgcctcattgactacgcccgaatcaagaagctgtgtacc
gacattaaggcctacatgctagcagacatggcccatatcagtggactggtggctgctaaa
gccatcccctctccctttgaacatgctgatctggtcacgtccaccacacacaaatccctc
cgaggagccagggctggcctcatcttctatcgtaaaggtgttcgctcagtggacaagaag
gggaaagagatcctgtatgacctggaggacaaggtgaacttctccgtgttcccctccctg
cagggcggacctcataaccatgccattgctggtgtggctgtggcactcagacaggctcag
tctcctatgtttaaggagtatatcgaccaggtactaagaaatgccaagtctatggctaca
gctcttctcaacaaaggctacacccttgtatcaggcgggactgacaaccacctggtcctg
gttgacttgcggcctaagggcattgacggggctcgggccgagagggtgctggagctcgtg
tcaattactgccaataagaacacctgccccggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagccttgacatccagacagttcaaagaagcagactttgtgcaa
gttgtcgagttcatggacgagggcttcaagatcgccttggacgtcaagaaaaagacagga
aaactccaggacttcaaaaacttccttcttcaggacccagagaccatggctcgcatggcc
aacctgcgccaccgcgttgaagcttttgccaggccctttcccatgccaggcttccacgac
cattaa
DBGET
integrated database retrieval system
