Etheostoma cragini (Arkansas darter): 117943441
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Entry
117943441 CDS
T07493
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117943441 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117943441 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117943441 (itgb6)
04810 Regulation of actin cytoskeleton
117943441 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117943441 (itgb6)
04515 Cell adhesion molecules [BR:
ecra04515
]
117943441 (itgb6)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117943441 (itgb6)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin beta subunits
117943441 (itgb6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117943441
NCBI-ProteinID:
XP_034725461
LinkDB
All DBs
Position
1:13326766..13340543
Genome browser
AA seq
782 aa
AA seq
DB search
MGLILLSLILSYWINTVEGSCSAASAVTCNECLQLSYHCAWCTQENFTDWFTVSERCDTL
DSLLEKGCARDLLEFPVSKGQILQDRPLGKKTGNVNSTQISPQKMALKLRPGSQVTFQVK
IQQTEDYPVDIYYLMDLSASMIDDLAMIKDLGSTLSKEMATLTSKFRMGFGSFVEKPVLP
FIKITEEDLANPCGGVGSTCLPTFGYKHVLSLTSSTERFNNIIAKQRVSANIDLPECGFD
AVMQAAVCGDKIGWRNDSMRLLVFVSDDDSHFGMDSKMAGIVIPNDGQCHLDANNEYSMS
TVQEYPTLGQLIDKVVENNILLIFAVTEVQNVNYKNYANLIPGATVGVLAKDSRNILELI
VTAYKELRSEIELEVLGDTEELQMSFTAICPNGTVIIDEKRCSNIKPGETVVFNVSVELP
GCLSGVRHFSLKPVGLQDSLEVQLESLCSCDCRQPPEANSSRCIESQGAFQCGVCVCQPG
FLGSECECNEESALLSNCLSHNESDVCSGQGQCYCGQCVCHASSFGRIYGRYCECDNYSC
VRFRGELCGGHGVCDCGECHCESGWTGEYCNCSTSTEACMSEDGAFCSGRGRCECGHCVC
SVPGASGDKCEKCPTCGDACSSARTCVECHLLDKDDVKLCDQKCSSPKISINTTADYDKS
PSIQCTLMKENECRISFNVVESETRTIVYDLQMFGCPEPPNIPMIILGVSLSIVCIGLIL
LAVWKLLVSVHDRKEVAKFEAERAKAKWQTGTNPLFKSSTSTFKNVTYKNTQREKIITLD
HY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggcttatactgctgagcctgattctttcgtactggatcaacaccgtggaagggtca
tgttcagctgctagcgctgtgacctgcaatgagtgtctgcagctcagttaccactgtgcc
tggtgcacacaggagaattttacagactggtttacagtcagcgaaaggtgtgacacattg
gatagcttactagaaaagggatgtgccagggacctgcttgagttccccgtctccaaaggc
caaatcctgcaggatcgcccacttggaaagaagacaggcaacgttaacagcactcagatc
tccccacagaaaatggcactcaagctgcgtcctggcagccaggtgactttccaggtcaag
attcaacaaacggaggactatcctgtggacatatactacctgatggacctctcagcatcc
atgatcgacgatctggcgatgatcaaagacttgggctccactttgtctaaagagatggcc
actctcaccagtaaatttcgaatgggctttggctcttttgtggagaaacctgtcctgccg
ttcatcaaaatcacagaagaagacctggccaacccctgcggcggtgtcggctcaacctgc
ctaccaacgtttggctacaaacacgtcttgtctttgacgagcagcaccgaaaggttcaac
aacataattgcaaagcagcgtgtatctgcaaatattgatttgccagagtgtggctttgac
gccgtcatgcaggcagctgtttgtggggacaagataggctggaggaatgattccatgcgc
ttgctggtgtttgtcagtgatgatgactcacactttgggatggacagtaagatggccggc
atcgtgattcccaacgatgggcagtgtcacctggatgccaacaacgaatactccatgtca
acagtgcaggagtatccaactcttggtcagttgattgataaggtggtggagaacaatatc
ttactgatatttgctgtgacagaagtacagaatgtcaactataagaactatgcaaatcta
atacctggcgccacagttggagtcctggcgaaagattcgcggaacatcctggaactgatt
gtaacagcctacaaagaactgcgttcagagattgaactggaggtccttggagacacagaa
gagctccagatgtcctttacagccatttgcccaaatgggaccgtcatcattgatgaaaaa
cgctgctccaacatcaaacctggagagacggtagtgttcaacgtgtctgtggagcttcca
ggatgcctgtccggagttcgccacttctccctcaaaccggtgggtttacaggacagtctg
gaggtgcaactggagtctctttgctcgtgcgactgccggcagcctcctgaagcaaacagc
agccggtgcattgagagccagggggctttccagtgcggcgtttgtgtgtgtcagccaggg
ttcctggggtcggagtgtgaatgcaatgaggaaagtgctttgttgagcaactgcctctca
cacaatgagtctgatgtatgcagtggacaggggcaatgctactgcggacagtgtgtgtgt
catgcatccagctttggacgcatctacggacgttactgcgagtgtgataattactcctgt
gttcgtttccgtggggagctctgtggaggccatggagtgtgtgactgtggggagtgtcac
tgtgaaagcggctggacaggggagtattgtaactgcagcaccagcactgaggcgtgcatg
tcagaggatggtgctttctgcagtggtcgggggagatgtgagtgtggccactgtgtctgc
tctgtacccggagcatctggggacaagtgtgagaagtgcccaacatgtggagacgcctgt
agctctgcaaggacctgtgtagagtgccatctgctagataaggacgatgtcaagttgtgt
gatcaaaagtgcagcagccccaaaatctccattaacacaacagcagattatgacaagagc
ccttctatccaatgcacgctgatgaaggagaatgagtgccggatctcatttaatgtggta
gaaagtgagacgcggactattgtctatgatctccagatgttcggttgccctgagcctccc
aacatccccatgattattctgggggtctctctttctatcgtgtgtatcggcctgattctg
ctggctgtgtggaagctgctggtgtcggtccatgaccgcaaagaagtggccaagtttgag
gctgagagggcaaaggcaaaatggcagacggggaccaaccctcttttcaaaagctcaaca
tctacttttaaaaatgtaacttataagaacacacagagagaaaagatcattacactggat
cactactaa
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