Etheostoma cragini (Arkansas darter): 117943481
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Entry
117943481 CDS
T07493
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04145
Phagosome
ecra04540
Gap junction
ecra04814
Motor proteins
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117943481 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
117943481 (tubb1)
09142 Cell motility
04814 Motor proteins
117943481 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117943481 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117943481 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117943481 (tubb1)
04147 Exosome [BR:
ecra04147
]
117943481 (tubb1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117943481 (tubb1)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117943481 (tubb1)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117943481 (tubb1)
Exosomal proteins of colorectal cancer cells
117943481 (tubb1)
Exosomal proteins of bladder cancer cells
117943481 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
117943481
NCBI-ProteinID:
XP_034725526
LinkDB
All DBs
Position
4:complement(19454831..19458025)
Genome browser
AA seq
473 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGLNATGIYEGDSNLQLERVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTPRGSQQYRALTVPELTQQIFDARNMM
TACDPRRGRYLTVAAIFRGRMSTKQVEEQMLAMQQKNSNYFVDWIPHNVKVAVCDIPPRG
LKMSSTFIGNNTAIQEIFRRVGEQFSLMFKRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATSDLDWEVEEEEVEGPALPATAMIQSQMEVKLETVTEISKGAPDE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtacatctacaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtcatcagtgaagaacatgggctcaatgcaacaggcatctatgagggagacagc
aacctccaactggagagggtcaacgtctacttcaatgaggcccatggtggtaaatatgtc
cccagggccctccttgttgacctggagcctggtacgatggacagtgtaaggggaagccgc
atcggagctcttttcaggccagataacttcatccacgggaactcaggagctgggaataac
tgggcgaagggccactacacagagggagcggagctggtggagcaggtcattgacagagta
aggaacgagagtgaaagctgtgattgcctgcagggcttccagctggttcactcactgggg
ggtggcaccggctctggcatgggaaccctgatcatcaacaagatccgagaggagtaccct
gaccgcatcatgaacaccttcagcgtcatgccctcccctaaagtctctgacacagtggtg
gaaccctacaatgccaccctgtcagtccaccagctcctggagaacacagacgagaccttc
tgcatagacaatgaggccctctatgacatctgtttccgcacgttaaaactgaccacgccg
acttacggggacctcaaccacctggtctgcatgaccatgagtggggtcacgacctctctg
agattccctggacagctcaatgcggacctgagaaagctggccgtcaacatggtgcctttc
cctcgcctccacttcttcatgccaggctttgcccccctgacgcctcgtggcagtcagcag
tatcgagccctcactgtgcctgagctcacccagcagatatttgatgcccgcaacatgatg
acggcttgcgacccaaggaggggccggtacctcacggttgctgccatcttccgtggtcga
atgtccaccaaacaggtagaagaacagatgcttgcgatgcagcagaaaaacagcaattac
tttgtggactggatcccacataacgtcaaggttgccgtgtgtgacatcccaccccgaggc
ctcaaaatgtcctccaccttcatcggcaacaacacagccattcaggagatattccggcgt
gtgggcgagcagttctccctaatgttcaaacggaaggcttttctccactggtatacagga
gaaggtatggatgaaatggagttcactgaggcagagagcaacctcaatgatctggtgtcg
gagtaccagcagtaccaagacgccacctctgatctagattgggaagtggaggaggaagaa
gtggagggacctgcattaccagctacagcaatgattcagtctcagatggaagttaaactg
gaaacagtgactgaaataagcaaaggtgctccggatgagtag
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integrated database retrieval system
