Etheostoma cragini (Arkansas darter): 117943500
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Entry
117943500 CDS
T07493
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04217
Necroptosis
ecra04622
RIG-I-like receptor signaling pathway
ecra04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117943500 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117943500 (cylda)
04625 C-type lectin receptor signaling pathway
117943500 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117943500 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117943500 (cylda)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117943500 (cylda)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C67
117943500 (cylda)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117943500 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
SH3_CYLD
UCH
Motif
Other DBs
NCBI-GeneID:
117943500
NCBI-ProteinID:
XP_034725561
LinkDB
All DBs
Position
1:complement(28663762..28687361)
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AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVIKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDEDDDALGELEVDHVNLVDEDQEFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSASLSSDNKFHSLPFSL
NRKTGPIDNMSHGPLSLSVQSVMGEQPEPPSPSAPPSPRPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHGKLSV
PKELQEGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSSWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtcataaaggagtgtacggtggagaagcctccccagaagaccctgagaatc
ccccgtggcagtctcggtcaggcatgccaggagcgcaacagcctggggcgaacacttccc
ccatgcaagggcaaaaagagtctccgcatcctggaccagaccaacgtggtgctgagccta
gacgagcgggacgttttggagctggatgagaaactggctgagctgctctttcctattacc
aattgtgaagagcgatatgcactgctctgcaacaagtcacggctagagcgggtccgtgat
attgactgtggttcaaaagtgcgcgtccagctgcggtcaggcgatgaacctctgcccggt
gtagtccgcttcaagggctcgctgctccctgacagagccctctctggaatctggtttggg
gtggagctgctggaggagggtcggggccagggcttcacggagggctcctaccagggccgc
cagcttttccgttgtgaggatgagtgcggtgtgtttgtggccctggacaaacttgaactc
tgggaggatgaagatgacgatgccttgggagagctggaggtggaccacgtcaatctggtg
gacgaggaccaggaattccctccattggagatcaactccagggtcctggtgcagaccagg
gacgggccagagagaggcaccatcattttctgtgacctgctgccgggaaatgagagcctg
ggctactatgtgggagttgacatggacaatcctattggggactgggatggtgtgtttgat
gggaagttgctgtgtaattttgccagtttggagcacactcgactcgtccctatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgtcctctggacaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatcccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggagaggac
cccgccaagtcacttactgacacgccccctgacttcaaccagtcctccccgccctcaaga
gccccgccctctgcctcgttgtccagtgacaacaagttccactctttgcccttcagcctg
aacaggaagaccgggcccattgacaacatgagccatgggcctctctctctttctgtccag
tcagtgatgggagagcagcctgagcccccatcaccttctgcccctccctcgccgcggcct
tcgacgcctcctcgagggcagccaggtctggaggtgggctctctggtggaggtgaaagag
aacccccctctgtgtggtgtcatccgctgggtgggcctgcctcctggcctgctggagcct
ttggctgggctagaactggaggaagagtgccctggctgcactgatggaaccttcaaaggt
acacggtatttcacctgcccacccaaaaaagccctgtttgtgaagctcaaatgctgccgc
cccgactcccgcttcccgtccctgcatcactcctccaaccccatagaacgatgcaactcc
attgcatttgggggttatttaagtgaagtagtacacgagaacacgcctccccgcacagaa
aatgatggtttggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgtcttttctccttcagctcagtactggacacggtt
ctgctgagaccacgctcgaagaccgatgtggagtattacagagagacccaagagctgttg
cgcacggagatagtcaaccccctgcgcatacatgggtatgtttgtgccactaaagtgatg
aagctaaggaggatcctggagaaagtagaagctgcctctgggtttacatctgaagaaaaa
gatcctgaggagttccttaacatccttttccatcacatactgagggtggacccattgctc
aagctaaggtcagcagggcagaaggttcaggactgttacttttaccagatcttcatggac
aagaaggacaaggtgggagttcccaccatccagcagctcctggagtggtccttcatcaac
agcgacctaaagtttgcagaggctccctcctgccttatcatccagatgccccgctttgga
aaggacttcaaaatgttcaacaagattttcccctcactagagttagacatcacagacctt
cttgaagacactccaagggaatgtcgaatctgcggaggcctggctctctacgagtgtcga
gactgttatgaagacggggatatcacggctggcaagattaaacagttctgtgaaaagtgc
aatacacaggttcacctccacccgaggaggaaagcccatcggcacggcaaactgtctgtc
cccaaggagctgcaagaaggtacggggcggcagggcagtttcccccgccagaggatggag
ctgtttgctgtgctgtgcatcgaaaccagtcactatgtggccttcgtcaagtacggcagt
gcagattcctcatggctcttcttcgacagcatggctgaccgtgacggagggcagaatggt
ttcaacatcccccaggtgtctccctgtccggaggtggaggcctacctgaaaatgacccca
gaggagctgcacaccctggatcccaagagcatccagggccaggcgcgacgcctgctgtgc
gatgcctacatgtgcatgtaccagagcccgaccatgagcctgtacaagtag
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