Etheostoma cragini (Arkansas darter): 117943501
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Entry
117943501 CDS
T07493
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117943501 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117943501 (prdm2b)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117943501 (prdm2b)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117943501 (prdm2b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117943501 (prdm2b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117943501 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-C2HC_2
zf-H2C2_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117943501
NCBI-ProteinID:
XP_034725557
LinkDB
All DBs
Position
4:complement(16990542..17005031)
Genome browser
AA seq
1727 aa
AA seq
DB search
MAIIGETVEILDEIPAHVWKGLPDCLSLRPSAINQSRIGVWATQVIPKGKRFGPFVGEKK
KRSQVTSNMYMWEVYFPARGWMCVDATDPMKGNWLRYVNWARSSEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASSLNRKNSPRAKRARRKLLEKAREVGL
VDLKKTSVTKPTVKEMWDGKQGLKEEDERPSRPSTLGPSQELQETHPMGSADHSDVEDMS
AVMTARGNGEAEEEEEEEEEEEEEEDADDDLEEPSEAQQQTSQHLPLAHSVQNKQPGSSL
TCGEESHKDLQGKLTCSSHAGQEPEVDPDPDPDGDLEGDPHGESYPCQHCERHFSTRQGL
ERHIHIHAITNQQTQLFKCRYCSKSFGSQVGRRRHERRHESGLKKRPGSLAGTATLLSPV
MQTDGSSPDCTSPTSQYIAIGSQFTGGPLHNTEMQRKELGPYADRPFILDENGESKELHP
CKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEASVQQQQQPGESPSTSPPPV
YVPSADTEDEVDRDDYTIDISKNISENLSFYIDGKIVSTSSVSTCEVIEVDSRSAALFGL
DTVIISPNQISQALKMEGRTSAAKQVSNIGQPAAKRRTSTPPFVPSLKVETESASFTASS
SSSSSSTSSSSNLLVGGLFQQAADSSAFQREKTVYLSPKLKQLLQTQDIQKSTITLLTES
HRLASPLSVTPLPGASGRFKRRTSSPPSSPQLSPACKTESCKAEGVSSFALKVPKLENHS
ASPAGNLLDKEDVDSQSLSENNVHGQTSSNSGGNSCNQQPLDLSNSVSRRSDSLNKVLGD
SALDLSFHRKSNVEPELKGSPAPQPLIKKRKPNTSMLEKVLMNEYLGLPLPGEEGPSTLA
NLGCFQSPSPSVASESAHPSPPSLTPVTMNPSSPGNSSVTSPTPPPPLLPTIPSLPAMPS
SPLSQPLDSSALPVLSPKMSPRSVDDKPMSDSEENLCAEESEDEEEEEDHISEPLDSSNT
PLKDPLNCFATSSPPELTSVDPPTTEDVSLTETFNSLLNGKMNQNLDSVTEKSLAALSPQ
PESSSASSSPPPAPQNPAPSLVSQSFPEIKVKEEPQHCVDELSVMNHAPQEGFDSSPQPA
APDKPSDKTSDSEEVDLTYCKTFVCNVCEEPFNSIKELSGHITEHAADWPFKCEFCVQLF
GDAPALLAHRTTLHGVGRIFVCSVCSKEFAFLCNLQQHQNDLHPNDICSHTTVESGKLRP
QNYTDASRAKEESNPSTPAPETTDEAAPHSDTVLPKEEPDVNGNHAEDAAEDPNEELYTT
IKIMASEGGKPKGPDVRLGINQHYPSYKPPPFPYHSRSHAGSVASATNFTTHNIPQTFST
AIRCTKCGNSFDNMPELHKHILACANASDKKRYTPKKNPIPLKQIVKSPNGVVSPSTAIA
GQSPFRRMGQPKRLNFNQDTGKTKMSALSKKKNQLVQKAISQKNKTATTAKKAIVKVEEE
QASNVCPHCSREFTYPASLSKHMTVSCPMKPVVKRGKKGLAEVKKEAVSVVDKNMNLRKK
ASDCEIPQTELEPKPLGKTRARSSGAADPEPSQASKGKNSATLGKLKRPASFPAPVSASK
KTKKGQVQSLPPTPSAPDTPSDSAQQRPAMRTQRMGKEAAPKKLAEAKSPPPQQPKKEER
FSLRTRDRVGGPVTRSLQMVNAAPSAEVKTEEPPIQEPKESQEVLLK
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggctattattggagagacagtggaaattctagatgaaattccagctcatgtgtggaag
ggtttgcctgactgtttgagtctcagaccttctgctataaatcaaagccgcatcggagtc
tgggccactcaggtcatccctaaaggcaagaggtttggcccatttgttggagagaagaaa
aaaaggtcccaggtgaccagtaacatgtacatgtgggaggtctatttcccagcacggggg
tggatgtgtgttgacgccactgaccccatgaaggggaactggctgcgatatgtgaactgg
gcacgctccagtgaagagcaaaatcttttccccctagagatcaacagagccatttactat
aaggttctaaggcctatcgggccaggagaggagttgctggtgtggtacactgtggaagac
aaccctgagataacagctgcactggaggaagaaagagccagcagtctgaacaggaaaaat
tcacccagggcgaagcgagccagaagaaagctgctggagaaagccagagaagttggtttg
gttgatcttaagaaaacaagcgtaaccaaaccaactgtcaaggagatgtgggatggtaaa
caaggtctgaaggaggaggatgagagaccatcaaggccatcaaccttagggccctcacag
gaactccaggaaacccatcccatgggaagcgcagaccatagcgatgtggaggacatgtca
gcagtaatgacggccaggggaaatggggaagcggaggaggaggaggaggaagaagaagaa
gaggaggaggaggaggatgccgatgatgatttagaggaaccgagtgaagcacagcagcaa
acttctcagcatttacctctggctcattcggtgcaaaataagcagccaggctcatcgctg
acctgtggtgaagaaagccataaggatttgcagggaaaattgacgtgttcttcgcatgca
ggacaagaaccagaggttgatcctgatcctgaccctgatggtgaccttgaaggtgatccc
cacggagagtcatatccctgtcagcactgtgaacgccacttctccaccagacagggtctg
gaacgtcacatacacattcatgccatcactaaccagcaaacacaactgttcaagtgccgg
tactgcagtaaatccttcggctcacaggtggggcggcggcggcatgagagaaggcatgag
agcgggcttaaaaaaaggcctggctctctggcagggactgccactctactcagtcccgta
atgcagactgatggttcaagtccggactgcaccagcccaacgagtcaatacatagccata
gggtcccagtttactggaggaccactgcacaacactgagatgcagagaaaagagttgggg
ccttatgctgaccgtccctttatattggatgaaaatggagagtcaaaggaactccatccc
tgtaagtactgtaataaagcatttggcacacacaccaacatgcgcagacaccaacgcaga
atacacgaacggcacttgttaccaaagggagttcgcaggaaaggcatgctgctgcaagag
gcatcagtgcagcaacagcagcagcctggtgagtcccccagcaccagcccgccgcccgtc
tacgtgcccagtgcagacacagaagatgaggtagacagggatgattacacaattgacata
tccaaaaacatctctgagaatttaagcttctacattgacggcaagattgtgtccaccagt
tcagtgagcacctgtgaggtgatagaggtggattccagatctgcagcactgtttggtctg
gacacagtcatcatcagcccaaatcagatcagtcaggcgctaaagatggagggtagaacg
agtgctgcaaagcaagtttccaacattggccagccagctgcaaaaagaagaacctctaca
ccaccatttgttcccagccttaaagtggagacagaatcagcatctttcacagcctcgtca
tcctcgtcatcatcctctacttcttcctcatctaacttgttagtgggtggactgttccaa
caagctgccgattcatcggcatttcaacgagagaaaacggtttatctctcacctaagctc
aaacagctccttcagacacaagacattcagaaatcaaccattaccctgttaacagaaagc
cataggctggcctccccgctgtcagtcacacccctgccaggggcttcaggcaggtttaaa
agaagaacatcctctcccccttcatctccacaactcagtcccgcgtgtaaaacagagagc
tgtaaagctgagggggtgagctcatttgccctcaaggtgccaaagctggaaaaccacagt
gcgtcacctgctgggaacctactggacaaggaagatgtcgacagtcagagcctttctgaa
aataatgtgcacggccaaacctcttctaatagcggtggaaattcctgtaatcagcagccg
ttggatttgtcaaactctgtcagtaggaggagtgacagtttgaacaaggtgcttggggat
tccgctcttgatttaagtttccatcggaagagcaacgtcgagcctgaattaaagggaagt
ccagcaccacagccactaataaaaaagaggaagcctaacacaagcatgcttgaaaaggtg
ctgatgaatgagtatttaggtctacctttgccaggagaggagggcccctcgaccttagca
aacctaggttgtttccagtctccctctccaagcgttgcatcagagtctgcccacccctct
ccaccgtctttgacccctgtcaccatgaacccatcttcccccggcaactccagtgtcaca
tccccaacgccacctcctcctctactacctaccataccttctctgccagctatgcctagc
tctcctctttctcagcctttagactcctctgcacttcctgtcctctcgccaaaaatgtct
ccaagatcagttgatgacaagcccatgtcggactcggaggagaatttgtgtgctgaagaa
agcgaagatgaggaggaggaggaggaccatatctctgagccactggactcctcaaacact
ccacttaaagatccccttaattgttttgcgacatcaagccctcctgagctgacatcagta
gatccgcccactacggaagatgtttctctgactgaaacgttcaacagtctgctaaatggc
aaaatgaaccaaaaccttgactcggtaacggagaaatctcttgctgctctctcgccacag
ccagaatcctcgtctgcctcatcatctcctcctcctgcaccacaaaatccagccccatca
ctggtttcacaatcctttcctgagatcaaggtaaaagaagagcctcagcactgtgtagat
gagctgtcagttatgaatcatgcacctcaggaaggttttgactcttcacctcagcctgct
gctccggataaaccgtctgataaaacctctgattcagaggaagttgacttgacatactgc
aagacgtttgtgtgtaatgtctgtgaggagccgttcaactccatcaaagagctcagtgga
catatcaccgagcatgctgcggattggcccttcaagtgtgaattctgtgtgcagctgttt
ggtgacgccccagccctgctggctcaccggacaacactacatggagtgggcaggatcttt
gtgtgctctgtctgctccaaggagtttgcatttctctgtaacctccagcagcaccaaaat
gatctgcatccaaatgacatatgttcacataccactgtagagagtggcaagcttaggcca
caaaactacacagatgcatccagagccaaagaggaaagcaatccctcaacaccagcacca
gagacgactgatgaagccgctccacacagtgacactgttttaccaaaagaagagcctgat
gttaatggtaatcatgcggaggacgcggcggaggaccccaacgaggagctgtacactaca
ataaagatcatggcctcagaaggtgggaagcctaaaggcccggatgttcgccttggcatt
aaccaacactaccccagttataaaccgcccccttttccttatcatagtcgttcccacgct
ggctcggtggcctcggctaccaacttcaccacccataacataccacaaacctttagcacg
gctatacgctgcaccaaatgtggcaacagctttgacaacatgcccgagctgcacaaacac
attttggcctgtgccaatgcaagtgataagaagcgttacactcccaagaaaaaccccatc
cccctcaagcaaatagtcaagagtccgaacggagtcgtgtcaccctcaacggccattgca
ggccagagtcctttccgtagaatgggccagccaaagagacttaactttaatcaagatact
ggtaaaacaaaaatgagtgccctcagtaagaagaaaaaccagctggtccagaaggcaatt
tcacagaaaaacaaaactgccactactgcaaagaaggctattgtcaaagttgaagaagag
caggcctctaacgtttgcccccactgcagccgggagtttacttatcctgcaagtctcagc
aaacatatgacagtcagctgtcccatgaagcctgttgttaaaaggggcaaaaaaggtcta
gcagaggtgaagaaagaggcggtgtctgtggtagacaaaaacatgaatcttagaaagaaa
gcttcagactgtgaaatcccgcagacagagctggagcctaaacccctgggaaagaccaga
gctcgcagctctggtgcagccgaccctgaaccctcccaggcgagcaaaggaaagaactct
gctacactaggcaaacttaagaggcctgcctcgttcccagcccccgtttctgccagcaaa
aaaacaaagaagggccaagttcagtctctacctcccaccccgtcagctccggacactcct
agtgacagtgctcaacagcggccagccatgagaacgcagcgtatgggcaaagaggcagca
cccaagaaattagcagaggccaaatcgccaccaccgcaacagccgaagaaagaggagcgg
ttctcccttcgaacgagggacagagtaggtggtccagtcaccaggagcttacaaatggtc
aacgcggctccttctgctgaggttaaaacggaagaaccaccaattcaagagccaaaagag
agtcaggaggtgctgctgaagtga
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integrated database retrieval system
