Etheostoma cragini (Arkansas darter): 117943519
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Entry
117943519 CDS
T07493
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04260
Cardiac muscle contraction
ecra04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117943519
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117943519
04261 Adrenergic signaling in cardiomyocytes
117943519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117943519
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117943519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
CENP-F_leu_zip
dCache_2
PGBA_C
Motif
Other DBs
NCBI-GeneID:
117943519
NCBI-ProteinID:
XP_034725578
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Position
4:15154069..15195821
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AA seq
1096 aa
AA seq
DB search
MAIGKGSCSIVCLVSIQIILISNASWPGAAGLTFPQQYTITHWAKRIEQEIDRVFQHITG
AQQLKGIYNEERRRFSLVKNQPRKIVEKAASDIEKLLAKKRKALDRLASEAERLQREHQW
RDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPASPWKAPDKID
LYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKPVNLP
EPVTLDFLDAEVEDSNKEEIRRQMIDGRPGEMQVKTLVKSIDEQYIDEVYRSYTWTPING
TDYSLGLVLPPYNEYFIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLHLSD
NNTQFLQNFLTLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNIAAELWDEDPEPFNSNYYRRSLDNKGYMFRAPSRSALDDPVGAENGT
IGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCE
MDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNISIFTRRQSF
HYQSACEPVSSSHTGAAPRGIFVPSIADILSLAWWSSTVAWSVTQHLLYGLAYNSWFYQD
DLLVSGFETRESSCMTIQSQFYFTNTNNSYNVLQDCGNCSRLFHAMRLENTNLLFVVAET
LPCSSCEIERLTRIRTEFQEENPCEVLSNARYRKGPTSCFDYSALENASECGRGHALQSS
IGVLLFIQLILPFFHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaagggtcttgcagcatcgtctgcttggtatctatccagattatcttg
atttccaacgcatcgtggcctggagcagcgggtctcacattcccccagcaatacacgata
acgcactgggccaagcgtattgaacaggagattgacagagtctttcagcacatcactgga
gctcagcagttgaaagggatatacaatgaagaaagacgacggtttagtctggtgaagaat
caacctcggaagattgtggagaaggcggcctcagatatagagaaactcctggctaagaag
cgcaaagcactcgataggttagccagtgaagcagagcggctccagcgagagcatcagtgg
cgcgatggaatcaaggagcttgacatggcttattatgactccaaggctgagctggattat
tattccatggatggagaaggagaggtggaaaatccttcacacatcaagctggagtttgtt
tatgatccaaacttcaaaaacaacgtcaactattcctacacagctgttcagattcctaca
gatatttataaaggagctccagtcattttgaatgagttgaactggacacaggcgctggag
aaagtgttcatggagaacagtcaggaggatccgtcactgctgtggcaggcgtttgggagt
gcaacgggtgtcactcgctactacccagcttcaccttggaaagccccagataaaatcgac
ttgtatgacgtcagaaggagaccctggtacatccaaggagcctcatcccccaaagatatg
gtcattcttgttgatgtgagcggcagtgtcagtggactcactctgaaactcatcaaagcg
tcagtgatggaaatgctggacactttgtctgatgatgactatgtcaacgtggccaggttt
aacgaaaaggcagaggccgtggttccctgctttaaacatctcgtccaggctaacgtgcgt
aacaaaaagatcttcaaggacgcagtgcagcagatgcaggctaaaggcactactgactac
aagtctggatttcattttgctttcaaccagctgttaaataagacaaatgttcctcgggcc
aactgcaataaaataatcatgctgttcactgatggaggagaggacagagctcaggatgtt
ttcatgcagtacaactggcccaacaaaacggttcgagtattcaccttttctgtgggtcaa
cacaactatgatgtcacacctttacagtggatcgcatgcaccaataaaggttactatttt
gagatccgttccatctgtgcgataaggattaacacccaggagtacctcgacgtgctgggt
cgccccatggttctggcaggcagcgatgccaaacaggttcagtggaccaatgtgtatcaa
gatgctttgggtctgggcatggtagtaactgggactttgcctgtatttaatctcacaatg
gatggaaactcacagaatcagctaatattaggtgtcatgggagttgacgtgcatctagac
gagataaagcgactaacaccacggtacaatcttggagccaatggatacatatttgccatt
gatccaaatggatatcttctccttcaccctaatcttcagccaaagccggtaaacctccct
gagcctgtgacgctggacttcctggatgcagaggtggaggacagcaataaagaggagatc
cggcgacaaatgattgatggaagaccaggtgaaatgcaggtcaaaactcttgtgaagtcg
attgatgagcaatacattgatgaggtgtacagaagctacacctggacccctatcaacggc
accgattacagtcttggtctggtattacccccctacaatgaatacttcatccaggcagac
ctgagtgatgtgatgctccagctccagtatatgcagtcgctgctgcccagctcctttgaa
tcctcaggacacgtgtttttggctccaagagaatactgcaaacgtctgcatctttctgac
aataacacccagtttttgcaaaacttcctgacgctcatgctggacatttccccagaatct
gatgagtgtgaccaaggcctcatccacaacctgattttggattctaggattatcgggcag
ctggcctctcgtgtttggaagaacaaggacttgaattcgtacggcttcctggctgtattt
gcatctactgatggaggtataacacgtgtttttcccaacatagctgctgagctttgggat
gaggatcctgaacctttcaattcaaattattacagaaggagcctcgacaacaaaggttac
atgttcagagctccatcaagatccgcgttggacgaccctgtaggtgcagaaaacggaacc
attggaattctggttagttcggctgtagaggttaatttagggggaaaactgctcaaacct
tcagttgtcggagtgaagctggatttggaggcatgggtggacaagtttaagatccttgcc
agcaatgtgtcagacagtcgacagggctcacacaagtgtggaccatccagaagctgcgag
atggactgtgaagtaaacactgacgacctcctctgctatctcatcgatgatggtggattt
ctggtaatgtccaatcagagagatcactggaaaaagattggccttttctttggtgatgtg
gacccttacctgatgcacgcactctataacatctcaatcttcactcgccgtcagtctttc
cactaccagtcggcatgtgaaccagtcagcagcagccatactggtgcagcaccgaggggc
atctttgtgccgtccattgctgacattctcagcttggcctggtggagctccactgttgca
tggtctgtgacccagcacctactgtatggactggcctacaacagctggttctaccaagat
gatctcctggtttcaggttttgagacaagggaaagcagctgtatgactatccaaagccaa
ttctactttacaaacaccaacaactcctacaacgtgctgcaggactgtggaaactgctca
cggctgttccacgcgatgcgcttagaaaacaccaacctcctctttgtggtcgctgagacg
ctcccctgcagctcatgtgagatagagagattgacacggatcaggacagaatttcaggag
gagaatccatgcgaagtactgagcaacgcgcgatatcgtaaaggcccgacatcctgcttt
gactacagtgccttagaaaacgcgtcagagtgtgggcggggtcatgcactgcagtcctcc
ataggagtccttctcttcattcagcttattctgcctttttttcatctctga
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