Etheostoma cragini (Arkansas darter): 117943617
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Entry
117943617 CDS
T07493
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117943617 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
117943617 (cntn3b)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Contactins
117943617 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
Others
117943617 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
117943617
NCBI-ProteinID:
XP_034725737
LinkDB
All DBs
Position
4:4542010..4591407
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AA seq
1026 aa
AA seq
DB search
MMLPWKQIVLLSITGCLAACTEDVIFQGPRWKTEPSDLILPINSPDQQATITCEAEGSPP
PQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNTWGSILSRRASLQ
FAYLENFKTQTVRSAVNVREGQGVVLLCGPPSHSGELTFAWIFNEYPHFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFTDS
VPAAKESVVKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNFQQEDAGTYE
CIAENRRGKNAARGRISFHAKPHWLQTMTDTALSIEENLFWECKANGKPKPSYSWLKNGE
QLMAEGRVQIENGALSIAATNLSESGMYQCVAENKHGIIYSGAQLMVLASPPSFSKRPLR
ALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERINLLPNGTLKIANVTRRDAAS
YTCVAKNQFGTASTTGRLLVTEPTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG
PPGPPDKVAVEEITDSTAQLSWTPGRDNGSPITGYIIQGRTPFTVGWQAVDTVPEVVNGN
MLTATVVALNAWVEYEFRVVARNTVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTPGVARYVFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVYSAEEVPGVAPKRVRTRSVSAVQIEVIWEALPAMPERVLGY
EVMYWEDDTKPDTVGKVRISGNYTLVNITGLNANTVYYLCVAAFNTAGPGPQSAPINTTT
KKPPPDRAPLNIQWTMIGSILTMHWDPIVALDTESKVTGYVVLLRRHRYNDINTILTNKT
TVELSLSANDNYLIQIKAMSEGGEGVASEPIHIHKLSMGARGSGAIRLSPLYLSAVLINA
MICSAW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaccatggaaacaaattgttctgctatcaatcactggatgccttgcagcctgt
acagaggatgtcatatttcaagggccaagatggaagacagagccaagtgacctcatttta
ccgatcaactccccagaccagcaggctaccatcacgtgcgaggcagaagggagccctcct
ccacagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaacctggacaaggaccaagacaccggggtg
taccagtgcacagccttcaatacgtgggggtccatcctcagccgcagagccagcctccaa
tttgcatatcttgaaaacttcaaaactcaaacggtgaggagtgctgtcaacgtccgtgag
ggccaaggtgtggttctgttatgtggaccaccttcacattctggagagctgacatttgca
tggatcttcaatgaatacccgcactttgtccaacaagacagtcgtcgtttcatctctcag
gagaccgggagtctgtacatcgctaaagtggagccctcagatgttggcaattacacctgt
gtggtaaacaacactgtcacaagggagaaggtactcagctcccccacaccactggtcctc
agaagtgacggagtaatgggtgaatatgaacccaaaatcgaagttcatttcacagattca
gttccagctgcaaaggaatcggtggtgaaactggaatgctttgccctgggaaaccccgtt
ccagaaataagctggaggagaaccagcggcatcccgttccccagcaaagtgaaaatgaag
aattcaaacgctgtccttgaaatccctaacttccagcaagaagacgcggggacgtacgaa
tgtattgcagagaatcggcgaggcaaaaatgctgcacggggtcgtatttcattccatgcc
aagccccactggctccagactatgacggacactgctttgtccatcgaggaaaacctcttc
tgggagtgtaaggccaatggaaagcctaaaccatcctacagctggctgaagaatggggag
caactgatggctgagggccgggtacaaatcgaaaacggggccctctctatagctgcgaca
aacctgtcagagtccgggatgtatcagtgtgtggctgaaaacaaacatggaattatttat
tccggtgcccagctaatggtgttagcttcacctccaagtttctccaaacgtccattaagg
gccttgctaaaagctcgctcaggcagcgaagtcactcttgaatgcaagcctcaggcctcg
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagagaaccgaaaggatt
aatttgcttccaaatgggactttaaagatcgccaatgtaaccaggcgggatgcagccagc
tacacgtgcgttgctaagaatcagtttgggacagcaagcacaactgggaggctgctcgtc
actgagcccaccaggatcaccatgaggcctactaacatggagattattgttggcgagagc
attgtgttaccctgccagattgcctgcgatccagctctggatgtttctttctcatgggca
ttcaacggccagctcatcgacttccagcgagacagcgatcattttgaaagagtgggcggg
agtatatcaggggatctgatgattcgtaacatccagctaaaccatggagggaaatatgtc
tgcgttattgacaccgatgtggagagcctatccacctctgccatcttggttgtcaaaggt
ccaccaggtcctccggataaggtagcagtggaagaaatcacagacagcacggcccagcta
tcctggactccgggaagggacaatggcagccccatcactggctacataatccagggccga
acgccctttactgtgggctggcaggctgttgacacagtgccagaggttgtcaacggtaac
atgctgacagccacagttgttgctctgaacgcatgggtggagtatgagtttagggtggtg
gcccgcaataccgttggcctaggagagcccagtccggcctctgccaagaccaggacagag
gatgccattcctgatacagctcccactgatgttggaggtggaggcggcacaaagtctgaa
ttagtgataacatgggagcctgttcctgaggaactacagaacggagagggctttggctac
atcatcgccttcaggcctgtgggcacagtcacgtggacgcgagcggttatctccacgccg
ggcgtggcacgttacgtcttccgcaatgacaccatcccacccttctcgccttttgacgtg
aaagtgggagcatacaacaaccgaggggaggggcccttcagctctattgccactgtgtat
tcagcagaagaagtccctggtgtggctccaaagagggttaggactagaagtgtgtctgca
gtgcaaattgaagtgatctgggaagctctccctgccatgcctgaaagagtgcttggatat
gaggtcatgtactgggaagacgacaccaagcctgacactgttggcaaagtgcgcatatct
ggaaactacacactggttaacatcacagggctgaatgcgaacacagtgtactacctctgt
gtggccgcattcaatacagctggccccgggccacagtcggcgcccatcaacaccaccaca
aagaaaccacctccagatcgggctccactcaacatacaatggaccatgattggctccata
ctcacgatgcactgggatcctatagtagctttggatacagagtcaaaggtcactggatat
gtggtgctgctgaggagacatcgctacaatgacatcaacactatcttgaccaacaaaacc
acggtggagctcagcctctccgccaatgacaactatctcattcagatcaaggccatgagt
gaaggcggcgaaggtgttgccagtgaacccatccacatccataaattaagtatgggagca
cggggctcaggagcaatccgcctcagcccattgtacctctccgcagtcctcatcaacgcc
atgatttgctccgcttggtga
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