KEGG   Etheostoma cragini (Arkansas darter): 117943640
Entry
117943640         CDS       T07493                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecra04121]
    117943640 (ubap2a)
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117943640 (ubap2a)
Ubiquitin system [BR:ecra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117943640 (ubap2a)
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117943640 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N UBA_8 Methyltransf_32 API5
Other DBs
NCBI-GeneID: 117943640
NCBI-ProteinID: XP_034725791
LinkDB
Position
4:8577247..8594015
AA seq 1247 aa
MMSSLGGDKARGPREKALPAATHTSQPQKQIQATAEQIRLAQVIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLVKEGPSDSKENKE
NREKKGEREASKGRPAANRKGRGASRGRQARPEENGVEVMPVDRGSDRGRRARGGGRGSG
GRGRGPPGSRFSAQGMGIFNPADYTSEAGSGTTQTEVWDTVANNSTDGTVTWRPTMEDWA
SEEWSEDVSLSETKVFTSKCAPAAENHITPGQSLDLASLLQKPVVGGREPPSSSSPQSLV
FTNSHHHQAPQQQPPHSRNANSSTSYAHAALSSVLGAGFGDLGQAKRTQPSAGAQILEQL
KGPGLGPLPSSQATPPASTQGSNTSIGRLPGLGAPVPPPSSSSWDIKLSESTSLSSQFSR
EFGLQPEPSLVLSQLVQRHTGPSLPLARQPSPPSQQQTPPASASPAPHHTSSPAQTGLVM
AVTGAKPPAPGTGLDPQGGSTPQQQRAQFKAPKRRIPPTSKIPSTAVEMPGSADIPGLNL
QFGALDFGSESAMPEFGVVDKCASAASRESTPAPCPAPPLNGAGTLSQTSLYSKPLSESL
GNPLSVALPLPLSSSEPVYHSSVPLPSLTPSSLVTANSSNPPSCSSTAPTTSSSVPSSSH
FSTVGGSYDGTMPPHTRLAFSQSKEATGPVMNGLNGVRTSVALDTSSASSTPKPESPSMN
ITNGTSAPSSLLPSTLPAHNSTTLSNLAQDMPSASHLNSLNSHVSNHSSVSALGSSSLTY
TSVDNSSVNCLAPSTGSYSSSQPSALHSTHNSSNSSSSGISHLANMGNNMSSTVAGIVGI
SGLHSAAIAASTALGLGSNGATATSNLSAPRTTPLLSSSTGKAPPNLSQGVPPLLPNQYI
MGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTATLSGRDGSLANNPYSG
EVTKFGRNDSTSPAPPTSLAAPQPPQGQSQGQSQAQPQPPQAQGQPQHHSSQQAFLPPGY
SYTGLPYYAGVPGAVPSAAAFQYGHTMFVPPGGPGPASAKQHAMGLGLGNPSASPFQQQT
QQQSSGYSQHTFSSGYEELTAGPAGVDYSKGYNSSSQAQAKSAASGPGKGVSVTSSNSGV
PDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLNPGAAPGGYAPAPFLHILPHQ
QPHSQLLHHHLAQDGQGGPSQRGQSSSLQQKSQVNKSSYGSSPYWAN
NT seq 3744 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgacaaggcccggggccctcgggaaaaagcactgcctgct
gccactcacacatcacaaccacaaaaacaaatacaggctactgctgagcagatccggctt
gcccaagtgatctatgacaagaatgatgctgactttgaggacaaagttaaccagctgatg
gaggtgactgggaagaaccaggatgagtgcatggtagcgctccacgactgcaacgaagat
gttagcagagccatcaactttctcttggaaagcacttcagacatgacctcatgggagacg
gtagggaagaagaagcccctggtgaaggagggtccatcagacagcaaggagaacaaagaa
aacagggagaagaaaggagagagggaggctagcaagggccgtccggctgccaaccgcaag
ggcaggggggccagtcgcggccgtcaggcacgtccagaggagaatggcgtggaggtgatg
ccagtggacaggggttcagatcgaggtcggagggctagaggtggtggccgaggatctgga
ggtagaggcagaggaccaccagggagccggttctcagcccagggcatgggaatcttcaat
ccagcagactatacctcagaggctggttcagggaccacacaaactgaggtgtgggacacg
gtggccaacaacagcacagatgggacagttacttggaggcctaccatggaagactgggca
tctgaggagtggagtgaggatgttagtctctcagagaccaaagtgttcacctccaaatgt
gcacctgctgctgagaatcacatcacacctgggcaaagtctggacctcgcttctctgcta
cagaagcctgtggttggaggaagagaaccaccttcgtcctcttcccctcagagtctggtc
ttcaccaactcccaccaccaccaggcaccgcaacagcagccgccccacagccgcaacgcc
aacagtagcacaagctatgctcatgctgctctgtcgtcagttctgggagctggttttggg
gacttgggccaggccaaaaggactcagcccagcgctggagctcagatactggaacagctg
aagggtcctggcttgggtccgctaccctcatcccaggccacgcctcctgccagcacccaa
ggaagcaacacctccattggccgactgccaggcctaggagcacctgtacctccaccttcc
tcatcaagctgggacattaagctttcagaatccacctcgctgtcctctcagttcagccgt
gagtttggcctgcagccagagccttctcttgtgctgagccagctggttcagaggcacacc
ggcccctccttgcctctggcacgtcaacctagtcctccatcgcaacaacaaactccccct
gcttcagcctcgcctgctccccaccacaccagctcaccagcacagacaggcctggtgatg
gcggttactggtgctaaacctcctgcccctggcacagggctggaccctcagggcggcagt
acaccacagcagcaacgggcacagttcaaagctccgaaacgaaggatacctcccacgtca
aaaatcccctccacagcagtagagatgccaggctcggctgacatccccgggctaaacctc
caattcggagctctagactttggctcggagtcggcgatgccagagtttggagttgtggac
aaatgcgcgagtgcggcatccagggagtccacaccggccccttgccctgcaccaccttta
aatggagcagggacactgagccagacaagcctgtactccaaaccgctcagtgagtccctg
ggcaaccctctctccgttgccctgcctctgcccctctcctcatcagagccagtgtatcac
tcctcggtgccgttgcccagcctcactccttcctcattagtgactgccaactcttcaaat
cctccctcctgttcttcaacagcccccaccacttcctcctctgtaccctcctcctcacac
ttctccacagtggggggaagttacgatgggaccatgccacctcacacacgactggccttt
tcccagagcaaagaggccacggggccagtcatgaatggtctaaatggtgtaaggacctca
gttgctctggacacttcatcagcatcctccacaccaaagccagagtcgccgtcaatgaac
atcaccaacggaacctccgcaccttcctccctcttaccctctaccctgcctgcacacaat
tccaccacactctccaaccttgcacaagacatgccctcagccagccatctcaactcactc
aacagccatgtcagcaatcattcctcagtctcagctctgggctccagctctctaacttac
accagtgttgacaacagcagtgtgaactgtctggctccttccactggctcctactcgtca
tcgcagccctcagcactccactcaacccacaacagcagcaacagtagcagcagtggcatc
agccacctggccaacatgggtaacaacatgagcagcaccgtcgctggtattgttggcatc
agtggacttcactccgctgccattgccgccagcacagcgctgggactcggctccaatgga
gctactgccacgtccaacctctctgcaccgaggaccacacccctgctctcctcctccact
ggtaaagctcctcctaacttgtcccagggagtgcctcctctactgccaaaccagtatatc
atgggcccaggggggctgctgccggcatacccacagatctatggttacgaagacctccac
atgctccagtccagactgccaatgccctctttgcaggattactatggaatcacattccct
ggtcccacagcgactctctctggtagagacgggagcctagccaacaacccctactcaggt
gaagtcacaaagtttggcaggaacgactccacctccccggcaccccccacaagcctggcg
gccccgcagcctccccagggccagagccaaggacagagccaggcccagcctcagcctcct
caggcccagggacagccgcagcaccacagcagtcagcaggcctttctgcctccaggctac
agctacacaggcctgccttactacgctggagtgcctggagccgtacccagtgctgctgcc
ttccagtatggccacaccatgtttgttcctcccgggggtccgggaccagcctcggccaag
cagcacgctatgggccttggtctgggaaacccctcagctagccccttccagcagcagaca
cagcagcagtccagcggttacagccagcacaccttcagctcagggtatgaggagctgaca
gcggggccagcaggagtggactacagcaaaggatacaactcctcctcacaggcacaagcc
aaatctgctgcttctggacctgggaaaggcgtctcggtgacctccagcaactcgggtgtg
ccggacatcagcggaagtgtttacaataagacccagtcttttgataagcagggtttccat
gcggggaccccccctcccttcagtctgccatcagcactggggggtccagggcctctaaac
cctggagcagcacctggaggctatgcaccggccccattcctccacatcctgcctcaccag
caaccacactcacagctgctgcaccaccatttagctcaggatggacagggtggtcctagc
cagcgtggccagtccagcagcctgcagcagaagagccaagtcaacaagtcgagctatggc
agctccccctactgggccaactaa

DBGET integrated database retrieval system