Etheostoma cragini (Arkansas darter): 117943710
Help
Entry
117943710 CDS
T07493
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117943710 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117943710 (stau1)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117943710 (stau1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117943710 (stau1)
mRNA cycle factors
Stress granule specific factors
117943710 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
117943710
NCBI-ProteinID:
XP_034725903
LinkDB
All DBs
Position
4:15842900..15851530
Genome browser
AA seq
695 aa
AA seq
DB search
MSQLQFQCPASPMPAASAQLQLGQPQPGYSFPCALGTLPSESASQPIRSSALPAGSATPY
STASVSNMANPKEKTPMCLVNEMARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALAETTLPKPTVRTPRNTGKNPADGMTHTMELNALCMKLGKKPMY
KPIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPVGPMLYHMELSIGGQQFIGKGRT
RQLAKHEAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKCNLPVNFEV
LKEEGPPHMKSFVVRVAVGEFNGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQTAEGMGPSKKVAKRNAAERMLELLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVT
FFEPGSVEEVALSSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGVCQASQAKDYSRTVP
NPGKATITAVIANELLYAGSSPTAETILKNKNNLNQLPHGPLTRPSEQLGFLASVQNLQV
EYKDFPKNNKNEFVSLINCSSHPPLISHGIGKDVESCHDMAALNILKLLSELDQQLNERT
GNGSVSRCGKQEMDGDLHLKQANSSTLTQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcttcagtttcagtgtccggctagccccatgcctgctgcctctgcccaactg
cagctgggacaaccacagcctggctacagtttcccctgcgctttaggcaccctaccctcg
gagagcgccagccagccaatcaggagctccgctctccccgcgggctcagccactccttac
agtaccgcctcagtgtctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagatggcccgttttaacaagatccaacctgagtataagctgctgtgtgagcaagga
cctgctcactccaagattttctcagttaggcttacactgggagatcagcactgggaggca
gaggggaccagcatcaagaaagcccagcattccgctgctgcatcggcccttgctgagaca
acacttcccaagcccaccgtgaggacaccccgcaacacaggcaagaacccagcagatggc
atgacacataccatggagttaaatgcactatgtatgaagcttggtaaaaagcctatgtat
aaaccgatcgacccatacccggggatgagaccaccaaacttcaactacaacgtccgagct
ccaggaccttaccagcgctctatgcaacagtactattacccatttcctccagtgggacca
atgttataccacatggagctttccatcggaggccagcagtttattgggaagggacgcaca
aggcagttggccaaacacgaggccgctgccaaggccttgaaagtcctgcacaaggagcca
atattgcaacaattgccagtgatgaatggagaacctgaagaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcactgaaatgcaacttacctgtcaactttgaggtt
ttaaaagaagaaggccctccccatatgaagagttttgtcgtgcgtgttgcagttggggag
ttcaatggagaaggcgaaggaaagagtaaaaagattgcaaagaagctggcagccgcagcg
gtgctgggggagttgaagaggctaccgcatattcccagtgtggaaaagacgctgccacgc
atcaaaaagaaaacaaaatccatcatcaagctgcagaccagcccagaatacggccagggg
atgaatcccatcagccgcctggctcagatccagcaggccaagaaggagaaggaaccggag
tacagcatggtgacagaacgaggtctacctcggcgcagagagttcgtcatgcaggtgaca
gtgtgcggccagactgcagagggaatgggacctagtaagaaggtggccaagaggaacgca
gcagagagaatgctggagctcttgggatataaagtgcctcaaccgcagcctcctaaacca
gcactcaaaactgatgaaaagaccccagtgaaaaaacctggcgatgggcgcaaagtgacc
ttctttgagcctggctctgtagaggaggtagcattgagttccaaggaggaggacttccgc
ctgccttacctgagccaccagcagctacctgcaggtattctgcccatggtcccggaggtg
gctcaagcagtcggggtctgccaagcatcccaggccaaggactacagtcgaactgtaccc
aacccaggcaaggccacaatcactgccgtgattgccaacgagctgctgtacgcaggatca
tcaccgactgctgagaccatcctaaagaacaaaaataatctgaaccagctgccccacgga
cccctcacaaggccttcagaacagctgggctttcttgcatcggtgcagaacctgcaggtg
gaatacaaagatttccccaaaaacaataagaatgagtttgtgtcactaataaactgctcc
tcccatccaccgctcatcagtcatggcattgggaaagatgtagaatcctgtcatgatatg
gctgcattgaatatactaaagttgctctcggagttggaccagcagttaaatgaaaggaca
gggaatggatccgtctctcggtgtggcaagcaggaaatggacggtgacttgcacctcaaa
caggctaactcaagcacattgacacagaccctggatggcactgtttag
DBGET
integrated database retrieval system
