KEGG   Etheostoma cragini (Arkansas darter): 117943787
Entry
117943787         CDS       T07493                                 
Symbol
snai1a
Name
(RefSeq) snail family zinc finger 1a
  KO
K05707  snail 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    117943787 (snai1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecra03000]
    117943787 (snai1a)
Transcription factors [BR:ecra03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    117943787 (snai1a)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-Di19 zf-C2HE Zf-C2H2_ZNF451_1st Zf-C2H2_ZNF451_6th zf-C2H2_7th_ZNF462 Teflon_C zf-C2HC_2 zf-C2H2_15 Zn_ribbon_Elf1 Zf-C2H2_ZNF451_C OSTMP1 DUF7410 DUF5810 Cpxcr1_C
Other DBs
NCBI-GeneID: 117943787
NCBI-ProteinID: XP_034726026
LinkDB
Position
4:6002978..6006433
AA seq 258 aa
MPRSFLVKNYFAKQKPNYSELECQNDTSLERYPFAELSPGDKTSTATCFTTGLVWDLSVL
PALYLPTSQTEPSATPGPLDLSSPSSLSSSASSCGEEDEGRTSDPPSPEPVHTYAPRQRM
KCTGVLPISPPEEEEETEAPVTAARPAFLCKHCPKEYTSLGALKMHIRSHTLPCVCTTCG
KAFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHAEVKKYQCGVCSRTFS
RMSLLQKHSSSGCSSSMV
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcctcgatctttcttggtcaaaaattacttcgcgaaacaaaagccaaactacagtgaa
ctggaatgtcagaatgacacttcactggagaggtatccttttgctgaactctcaccaggg
gacaaaacctctacagccacctgcttcacaacaggtctggtgtgggacctaagtgtcctg
cccgccctctacctgcccacctcccaaacagagccctctgccaccccaggccccctggac
ctcagctccccttccagcctcagcagcagcgccagcagttgtggagaggaggatgaagga
cgcacatcagatccccccagccctgaacctgtacacacgtatgcccctcgccagcggatg
aaatgcaccggcgttttgcctatcagtccccctgaggaggaggaggaaacggaggccccc
gtcacagcagcaaggccagcctttctctgcaaacactgcccaaaagagtacaccagcctc
ggggctctgaagatgcacatccgctcacacaccctgccctgtgtgtgtaccacctgtgga
aaggctttctccaggccatggctgctgcgcggtcacatccgcacacacacaggtgagcgc
ccattctcctgccctcattgcaaccgggcctttgctgaccgctccaacctgcgggctcat
ctgcagacccacgctgaggtgaagaagtaccagtgtggcgtctgctctcgcaccttcagc
cgcatgtcgctgctgcagaaacacagctcctccgggtgcagctcctctatggtgtga

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