Etheostoma cragini (Arkansas darter): 117943867
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Entry
117943867 CDS
T07493
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04110
Cell cycle
ecra04218
Cellular senescence
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117943867 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117943867 (rbl1)
04218 Cellular senescence
117943867 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117943867 (rbl1)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117943867 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
117943867
NCBI-ProteinID:
XP_034726162
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Position
4:complement(30330821..30339615)
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AA seq
872 aa
AA seq
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MIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLINPTFRGLPALYRADGHVSADEPPPCV
LERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILKGNEVHLTELLDPQSFVDNNKAIN
REYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQESSASQTNAQRQLQQHVEKSGSLAP
STPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRAAPSENLLHVFKSCSRNPTESI
QSRVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKILENVMVQETKRLQGKD
MSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFKVIEVFIRSEEGL
SRDMVKHLNLIEEQVLESRAWSADSALWSVLQAAGNKVPTVEEVNFSSSLDSGSGSTSGG
QSHLPLVALSPIIHPRIREFRSGLGSARKDVPPSPLSVHDRYSSPAAGSAKRRLFGDDPP
ARTPGVVPLGSPMTSPAKRLTYGSSSTLRIGPQGAPATVLSFPLQGLNNDRTITLIPVQP
CDSSGTITAQFLLTASPSRATIASAAPPASDPQAGISRPRRTGSLALFFRKVYHLASVRL
RDLCVRLDVSSELRGKIWTCFEHALVHCTGLMRDRHIDQLLLCSVYIISKITKEAVTFHD
IMKCYRSQPQASSHVYRSVLLRCTPMEQVTDENMEVDPVSGGESAEKPNPVPGDTNSDQS
GEEERGDLIQFYNNVYVLKMKSFALRYATHDNRTDAPPLSPFPSVRAQPLSPRRVSQRHS
LYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGSLSRKRAFAMEGDVMMSSVC
DSPSKRACPESASSPDVLLKMLQDVVSERQSH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagatgacctagttaactcgtaccaccttctgctttgctgtctggacctggtg
tttggaaatgctctgctctgctccaacaggaaggacctcatcaaccccacattcagaggt
ctgccggctctgtaccgcgctgacggccacgtttcagcggacgagcctcccccgtgtgtg
ttggagaggttgtgtgagctgcacgacgggctggtggtggaggccaaaggcatcaagcag
cactacttcaaaccctacatacagaaactgtaccagaagcagatcctgaaaggcaacgag
gtccatttgacagaactgttggatcctcagagcttcgttgataacaataaagccataaac
agggagtatgaggagtacgtgttgacggtgggggattttgatgagcgggtgtttctggga
gccgatgccgacgaggaaatcgggactccaaggaagattgttcaggagtcttctgccagc
cagacgaacgctcagagacagctgcagcaacatgtagagaagtctggctctctcgctccc
tccacccctctgacgggacgagtctacctgaaggagaaggacctgctggtcacacccgtc
tcctcggcgacgcagagtgtcagccggctgcagagcatggtggcggggctgagggcggcc
cccagtgaaaacctgcttcacgtcttcaagtcttgctccagaaatcccacagagtccata
cagagcagagtcaagacactgggacaaaccttcaaagaacattacaccaacgactccgag
gacatgcccggctctcatatagactttgcagagaaccgtttaaaactggctgagatcctg
tactataagatcctggagaacgtgatggtgcaggagaccaaacggctgcaaggcaaagac
atgagtgtgttattggagcaggatatcttccactgctccctgatggcatgttgtctggag
gtggtgttgttctcctacagctcccagagaaccttcccctggatcatcaacatcttcaag
ctgaccccattctacttttttaaggtgatcgaggtgtttatccgctcagaggaaggcctg
tccagagacatggtgaagcacctgaacctgatcgaggagcaggttctggagagcagagcg
tggagcgcagactctgccctgtggagcgtcttgcaggctgctgggaacaaggtccccacg
gtggaggaggtaaatttttcctccagtctggactctggttctggttctaccagcggaggt
cagtcccacctgcctctagttgccctctccccaatcatccacccccgcatcagggagttc
agatcaggcctgggcagtgcacgcaaagatgtgcctccctctccgctttcagtccatgac
aggtacagttccccggcagctggcagcgctaaacgacggctctttggggacgaccctcca
gcccgaaccccaggggtggtccccctcgggagcccgatgacatcaccggccaaaaggttg
acctacggctcaagcagcaccctgaggatcggacctcagggcgcccctgccaccgtcctc
agtttcccactgcaaggtttgaataacgaccgcactatcacactgatcccggttcagccg
tgcgactcctctggtaccatcacggctcagttcctgctgaccgcctcgccgagccgcgcc
accatcgcctctgctgctcccccagcctccgacccccaggcaggcatcagccggccgcga
cgtaccggctcactcgctctgttcttcaggaaggtgtaccacctggccagcgtacgtctg
agggacctgtgtgtgaggttggacgtctcgtcggagctgcgagggaaaatctggacgtgc
tttgagcacgctctggtgcactgcactggtctgatgcgggaccgccacatcgaccagctg
ctgctgtgcagcgtctacatcatatccaaaatcaccaaagaggcggtcaccttccatgac
atcatgaagtgttatcgcagccaaccacaggccagcagccatgtgtaccgcagcgtgtta
ctgcgatgcacccccatggagcaggtaaccgatgagaacatggaggtggatcctgtttcg
ggcggcgaatccgcagagaaacccaatccggtcccaggagacacaaactcagaccaatca
ggggaggaggagcgtggcgacctcatccagttctacaacaacgtctacgtgctgaagatg
aaaagtttcgctctgcgttacgccacccacgataaccggacggacgctcctcctctctct
ccgttcccatcggttcgggctcagcctctctctcctcgtcgggtttctcagagacactcg
ctgtacgtttcccctcacaagaactctgcaggctgcctcacacccaactcctacacctac
aggatcaacagcagcccgtccaaggagttatccgacatcaaccggatgatccggcagggc
tcgctgagccggaagagggccttcgctatggagggggatgtgatgatgtcatcggtgtgc
gactcccccagtaagagggcgtgtccagagagcgccagcagccccgacgtgctgctgaag
atgctgcaggacgtcgtgtcggagcgccagagccactga
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