KEGG   Etheostoma cragini (Arkansas darter): 117943867
Entry
117943867         CDS       T07493                                 
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04110  Cell cycle
ecra04218  Cellular senescence
ecra04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    117943867 (rbl1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117943867 (rbl1)
   04218 Cellular senescence
    117943867 (rbl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecra03000]
    117943867 (rbl1)
Transcription factors [BR:ecra03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    117943867 (rbl1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 Rb_C
Other DBs
NCBI-GeneID: 117943867
NCBI-ProteinID: XP_034726162
LinkDB
Position
4:complement(30330821..30339615)
AA seq 872 aa
MIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLINPTFRGLPALYRADGHVSADEPPPCV
LERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILKGNEVHLTELLDPQSFVDNNKAIN
REYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQESSASQTNAQRQLQQHVEKSGSLAP
STPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRAAPSENLLHVFKSCSRNPTESI
QSRVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKILENVMVQETKRLQGKD
MSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFKVIEVFIRSEEGL
SRDMVKHLNLIEEQVLESRAWSADSALWSVLQAAGNKVPTVEEVNFSSSLDSGSGSTSGG
QSHLPLVALSPIIHPRIREFRSGLGSARKDVPPSPLSVHDRYSSPAAGSAKRRLFGDDPP
ARTPGVVPLGSPMTSPAKRLTYGSSSTLRIGPQGAPATVLSFPLQGLNNDRTITLIPVQP
CDSSGTITAQFLLTASPSRATIASAAPPASDPQAGISRPRRTGSLALFFRKVYHLASVRL
RDLCVRLDVSSELRGKIWTCFEHALVHCTGLMRDRHIDQLLLCSVYIISKITKEAVTFHD
IMKCYRSQPQASSHVYRSVLLRCTPMEQVTDENMEVDPVSGGESAEKPNPVPGDTNSDQS
GEEERGDLIQFYNNVYVLKMKSFALRYATHDNRTDAPPLSPFPSVRAQPLSPRRVSQRHS
LYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGSLSRKRAFAMEGDVMMSSVC
DSPSKRACPESASSPDVLLKMLQDVVSERQSH
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgatcggagatgacctagttaactcgtaccaccttctgctttgctgtctggacctggtg
tttggaaatgctctgctctgctccaacaggaaggacctcatcaaccccacattcagaggt
ctgccggctctgtaccgcgctgacggccacgtttcagcggacgagcctcccccgtgtgtg
ttggagaggttgtgtgagctgcacgacgggctggtggtggaggccaaaggcatcaagcag
cactacttcaaaccctacatacagaaactgtaccagaagcagatcctgaaaggcaacgag
gtccatttgacagaactgttggatcctcagagcttcgttgataacaataaagccataaac
agggagtatgaggagtacgtgttgacggtgggggattttgatgagcgggtgtttctggga
gccgatgccgacgaggaaatcgggactccaaggaagattgttcaggagtcttctgccagc
cagacgaacgctcagagacagctgcagcaacatgtagagaagtctggctctctcgctccc
tccacccctctgacgggacgagtctacctgaaggagaaggacctgctggtcacacccgtc
tcctcggcgacgcagagtgtcagccggctgcagagcatggtggcggggctgagggcggcc
cccagtgaaaacctgcttcacgtcttcaagtcttgctccagaaatcccacagagtccata
cagagcagagtcaagacactgggacaaaccttcaaagaacattacaccaacgactccgag
gacatgcccggctctcatatagactttgcagagaaccgtttaaaactggctgagatcctg
tactataagatcctggagaacgtgatggtgcaggagaccaaacggctgcaaggcaaagac
atgagtgtgttattggagcaggatatcttccactgctccctgatggcatgttgtctggag
gtggtgttgttctcctacagctcccagagaaccttcccctggatcatcaacatcttcaag
ctgaccccattctacttttttaaggtgatcgaggtgtttatccgctcagaggaaggcctg
tccagagacatggtgaagcacctgaacctgatcgaggagcaggttctggagagcagagcg
tggagcgcagactctgccctgtggagcgtcttgcaggctgctgggaacaaggtccccacg
gtggaggaggtaaatttttcctccagtctggactctggttctggttctaccagcggaggt
cagtcccacctgcctctagttgccctctccccaatcatccacccccgcatcagggagttc
agatcaggcctgggcagtgcacgcaaagatgtgcctccctctccgctttcagtccatgac
aggtacagttccccggcagctggcagcgctaaacgacggctctttggggacgaccctcca
gcccgaaccccaggggtggtccccctcgggagcccgatgacatcaccggccaaaaggttg
acctacggctcaagcagcaccctgaggatcggacctcagggcgcccctgccaccgtcctc
agtttcccactgcaaggtttgaataacgaccgcactatcacactgatcccggttcagccg
tgcgactcctctggtaccatcacggctcagttcctgctgaccgcctcgccgagccgcgcc
accatcgcctctgctgctcccccagcctccgacccccaggcaggcatcagccggccgcga
cgtaccggctcactcgctctgttcttcaggaaggtgtaccacctggccagcgtacgtctg
agggacctgtgtgtgaggttggacgtctcgtcggagctgcgagggaaaatctggacgtgc
tttgagcacgctctggtgcactgcactggtctgatgcgggaccgccacatcgaccagctg
ctgctgtgcagcgtctacatcatatccaaaatcaccaaagaggcggtcaccttccatgac
atcatgaagtgttatcgcagccaaccacaggccagcagccatgtgtaccgcagcgtgtta
ctgcgatgcacccccatggagcaggtaaccgatgagaacatggaggtggatcctgtttcg
ggcggcgaatccgcagagaaacccaatccggtcccaggagacacaaactcagaccaatca
ggggaggaggagcgtggcgacctcatccagttctacaacaacgtctacgtgctgaagatg
aaaagtttcgctctgcgttacgccacccacgataaccggacggacgctcctcctctctct
ccgttcccatcggttcgggctcagcctctctctcctcgtcgggtttctcagagacactcg
ctgtacgtttcccctcacaagaactctgcaggctgcctcacacccaactcctacacctac
aggatcaacagcagcccgtccaaggagttatccgacatcaaccggatgatccggcagggc
tcgctgagccggaagagggccttcgctatggagggggatgtgatgatgtcatcggtgtgc
gactcccccagtaagagggcgtgtccagagagcgccagcagccccgacgtgctgctgaag
atgctgcaggacgtcgtgtcggagcgccagagccactga

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