Etheostoma cragini (Arkansas darter): 117943898
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Entry
117943898 CDS
T07493
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117943898 (ccdc174)
03041 Spliceosome [BR:
ecra03041
]
117943898 (ccdc174)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117943898 (ccdc174)
Spliceosome [BR:
ecra03041
]
Complex C
Other components
EJC/TREX
117943898 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
117943898
NCBI-ProteinID:
XP_034726217
LinkDB
All DBs
Position
4:complement(13415217..13419664)
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AA seq
567 aa
AA seq
DB search
MDKKKKPFDVTASSLVDLKAELYRKQEQFKQEKLGHENTGAGLTSKSKLKKPNVWSKQNA
GVSARAEKDAEQLTEEQCSLDTSKRRLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKRETLAQKEIERENEERENSSPVPPPQNPDEEWVDYVDALGRSRRCMKKDLPGFKKMD
QDLHGKGKASAEKTLLSEDMRRELQRQEWEREEEEAMNRPIGPIHYEDIRGQEARDLGVG
YFAFAQDEEQRRKQRETLDMLRDQTTDQRTKREQLKDKRQVILQARLAKVRQRKIKKTKL
DGTEDEQKVEDNEVPGGEDKGELIGPCPPPEDSLEVSTLKKVEVEIQERKDTKPGVPHVR
EWDRGKEFMFSEWTTRRREERESEFAPPSAYFNEEKRARLGRNNTQKIKPKMSFKWTKSP
ERISESKEEPQFEPKTAASPPQPQQNPPPPLHPQNSSQSFPSDHPADSAPVSAPPFQPLY
PPPSFYPPPLPQFAGPPHLLPPFSPQYPNQYHPQYHPQYHPQYHAQYPPQPQSQSLPQPP
PQPVDLNQARQPAQSLDDMLSFYRSTT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacccttcgatgtgactgcttcgtcgctggtggaccttaaagct
gaactgtacagaaagcaggaacaattcaaacaagaaaaacttggccatgaaaatactggt
gctggattgacttcaaaatccaaactcaagaaacctaatgtctggagcaaacaaaacgct
ggtgtttcagcaagagctgaaaaagatgcagaacagctgactgaggagcagtgcagcctt
gatacatcaaaacgcaggttggaggagaaggccaaactctacgagcaaatgactaaagga
gactttccagatgaagagacagagggactgttcctggtggatttcacccagaagattatt
gacaaaaagagagaaacacttgcacagaaggaaatagaaagagagaatgaggaaagagaa
aactcgtctcctgtcccccctcctcaaaacccagatgaggaatgggtggattatgtggac
gctttgggtcgatcccgaagatgcatgaagaaagacctgccaggttttaagaaaatggac
caagaccttcacggaaaaggaaaagcctcagctgagaagaccttactctcggaggacatg
cgtcgagagctgcagaggcaggaatgggagcgggaggaagaggaggctatgaataggcct
attggaccgatccactacgaggacatccgaggacaagaggctcgggatctcggtgtgggt
tactttgcgtttgctcaggacgaagagcagcgtagaaagcagagagaaacactggacatg
ctcagagaccagacaacagaccagcgcactaagagagaacaattgaaggacaagaggcag
gtcatcctgcaggcccgactggccaaggtgaggcagaggaagataaagaagaccaagctg
gatggcactgaggacgaacaaaaagtggaggacaatgaagtcccaggtggtgaggacaaa
ggtgaattaataggaccctgtcctccaccagaggactccttggaggttagcacactgaag
aaggtggaagtggagatccaggaaagaaaggacaccaaaccaggagttcctcatgtcaga
gaatgggacagaggcaaagagtttatgtttagtgagtggaccactcggcgccgcgaagag
cgagagtcagaatttgcacctccctctgcgtattttaatgaggagaagagagcgagacta
gggaggaataacacacagaagattaaacccaagatgtccttcaagtggaccaaaagccca
gaaaggatctctgagagcaaagaggaaccacagtttgagcctaaaactgctgcttcacct
cctcaacctcaacaaaaccctccacctcctctacatccacagaactcatcacagtcattc
ccttcagatcacccagcagattcagctcctgtgtctgctcctccatttcaacccctctat
ccccctccctccttttatcctccacccctgcctcagtttgctggaccacctcacctactt
cctccgttttccccacagtacccgaatcagtatcacccccagtatcacccccagtatcac
ccccagtatcacgcccaatatccacctcagccacagagccagtctctgcctcagccgccc
ccccagcccgtagacctcaaccaggcccggcagcctgcacagagtctagacgacatgctg
tccttctacaggagcactacctga
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