Etheostoma cragini (Arkansas darter): 117943938
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Entry
117943938 CDS
T07493
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00450
Selenocompound metabolism
ecra00970
Aminoacyl-tRNA biosynthesis
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117943938 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117943938 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117943938 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117943938 (mars1)
Enzymes [BR:
ecra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117943938 (mars1)
Amino acid related enzymes [BR:
ecra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117943938 (mars1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117943938 (mars1)
Prokaryotic type
Other AARSs
117943938 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_N_3
GST_N_2
Motif
Other DBs
NCBI-GeneID:
117943938
NCBI-ProteinID:
XP_034726272
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All DBs
Position
4:complement(18835555..18854171)
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AA seq
921 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVQCDVQYVNHEERVVPFLSRPALPALLLPSGLHLFSS
NTICRYLFEISGQDSSERCNQWLEWEATDLQPALLQALHMAVLHGKGSEVSEVLQGPLNF
LEQSLSKGNTPYLTGEALSVADVVLWAALYPVLSDSSLACEHTSVKAWFDRGAVLHSCES
AAQKVLQGKGLQGMKSYMQRQPAPQSSQSRDTQPRNSNPAEGVEDERAVSEEEMEAAALT
WSKGLNSCPLATDRQHPILPHEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGR
LRGWNMLFICGTDEYGTATENKAREEGMTPQQICDKYHAIHSSIYKWFQIDFDFFGRTTT
EKQTEIAQDIFWRLHKHGFLMEDTVEQLRCENCQRFLADRFVEGICPHCSYPEARGDQCD
KCGRLINAVELREPQCKVCRQTPVVRSSKHLFLDLPKLEPQLEQWLEKSTSTGDWTANAK
QIARSWLRDGLKPRCITRDLRWGTPVPHPDFKDKVFYVWFDAPIGYLSITSNYTDKWEKW
WKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLVATEYLNYEDTKFSKSRG
VGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGM
FVTKFFEGCVPAMELQQEDKRLLALVGWELQQYIQLMDKVKIRDALRHILNISRHGNQYI
QVNEPWKKIKGGDTERQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQLNAPQSCVN
TMLRGTGTFVCSLSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPPKKKTTAQRA
SSSQPAAAAEVATVNGVDPEKAKQLTQAVTEQGEKVRALKAQKVEKAVITAEVAKLLDLK
KQLALAEGKSSEPAPQKGKRK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgaaggcaacccgcactgcctgaaggtgttagctgcgttagaa
gtgactggagttcagtgtgacgtccagtatgtcaaccacgaagagagagtggtgcccttc
cttagccgtccagccttgccagccctgctcctgcctagtggactgcaccttttcagctcc
aatacaatctgccgatacctgtttgaaataagtggacaagactccagtgagcgttgcaat
cagtggcttgaatgggaggccacagatcttcagcctgctctgctacaggcccttcacatg
gctgtgctgcatgggaaaggatcagaggtgtccgaggtcctccagggtcccctaaacttc
ttggagcaaagcttgagcaaagggaacacgccatatttaactggggaagcactttcagtt
gctgatgttgttttgtgggctgcgctgtatcctgttttatctgactcttcactagcttgc
gaacacacgtctgtgaaggcctggtttgaccgtggggctgttctgcacagctgcgagtct
gctgctcagaaagtgctgcagggaaaaggcctgcagggcatgaagagctacatgcagagg
cagcctgcccctcagagcagccaaagcagagacacacagccacgcaacagcaaccctgct
gagggtgtggaagatgagcgtgcggtttcagaagaggaaatggaggcagctgctctcacc
tggagtaaaggcttgaactcctgcccattggctacagacagacagcaccccattctgcca
cacgagggcaaacgaaacctccttgtaaccagtgccttgccttatgtcaacaacgtcccc
cacctgggcaacatcattggctgcgtcctcagcgctgatgtcttcagcaggtacggccgt
ctgcgaggctggaacatgctgttcatatgtggcacagatgaatatggcacagctacagag
aacaaggccagagaggagggtatgacaccacagcagatctgtgacaagtaccatgccatt
cactccagcatctacaagtggttccagattgactttgacttttttggcagaaccaccacg
gagaagcagacggagatcgcccaggatattttctggagactccacaagcacggtttccta
atggaagacacggtggagcagttgcgttgtgaaaactgccagcgcttcctggccgaccgc
ttcgtagaaggcatctgtcctcactgcagctacccagaagctcgtggggaccagtgtgac
aagtgcgggcggctcatcaatgctgtggaactcagggaaccccagtgtaaggtctgcagg
cagactccagttgtccgctcctccaaacatcttttcttggacctgccaaagctagagcct
cagttggagcagtggctggaaaagtcaaccagcacaggagactggacagcaaatgccaaa
cagatcgcacgctcctggctaagagatggactcaaacctcgctgcatcaccagggacctg
cggtggggaacaccagtgcctcatcctgactttaaagacaaggtgttctacgtgtggttt
gacgcccccattggttatctgtccattacatccaactacaccgacaaatgggaaaagtgg
tggaagaatcctcatcaggtggagctgtacaacttcatggccaaagacaatgtgcccttc
cacagtgtggtgtttccctgctccctactgggagctcaggacaactacactctggtcagc
caccttgttgccactgagtatctgaattacgaggacacaaagttctccaagagccgtggt
gtgggtgtgtttggagacatggccaaggacacgggcatcccgtctgatgtgtggcggttc
tacctcctgtacgtgcgtccggagggacaggattcagccttctcctgggctgacatggct
ctgaagaacaactctgagctgctcaacaacttgggcaactttatcaacagagctggcatg
tttgtcactaagttctttgagggctgtgtgcctgcaatggagctacagcaggaagataag
aggctcctggctctggtgggctgggagctgcagcagtacatccagctcatggacaaagtc
aaaatacgcgacgctctaagacacatcctcaacatctctcgccatggcaaccagtacatc
caggtcaatgaaccctggaagaagatcaagggaggagacacagaaaggcagcgtgcgggc
acagtcaccggggtgtctgtgaatattgcctgtttgctgtcagtgatgctgctgccatac
atgccagcggtcagccaaaccatccgagatcaactcaatgcccctcagtcttgcgtcaat
accatgttgcgaggcactggcacctttgtatgttccctgagtgcgggccaccgcatcggc
actgtcagtccgttgttccagaaactggaggtggaccagattgaggctttgaagaagaga
tttggtggacagcagcctgaagatgaaccacccaaaaaaaagacgacagctcagagagcc
agcagctctcagcctgctgccgctgccgaggtggcgacggtgaacggagtggacccggag
aaagccaagcagctcacacaggctgtgactgagcagggggagaaggtgcgagcacttaaa
gcccagaaggtggagaaggccgtgatcacagcagaggtggccaaactgttggaccttaaa
aaacagctggctctggctgaggggaagagctctgagcctgcacctcagaagggcaagagg
aagtga
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