Etheostoma cragini (Arkansas darter): 117943948
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Entry
117943948 CDS
T07493
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117943948 (msx1a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117943948 (msx1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
117943948
NCBI-ProteinID:
XP_034726289
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Position
4:9367209..9369283
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AA seq
282 aa
AA seq
DB search
MAPSIAMSALTAGLKSEELPPRSVLGSRGEMQTSLSPTEETVKPKVAILPFSVEALMADR
KPSREVASPDAPSVPGTSHALGKVVRMGSFGSLDSSVPALAMSSSFSVDDIMNMPEDVLI
KPESPDSNDRTSWLQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFR
QKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGI
SFPLGAHVPASYGSHPFQRHSLPVSPVGLYAAHLGYSMYHLA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgatcgccatgtcagctttgaccgctggtttgaaatctgaagaactccct
ccccgctccgttctcggcagcagaggcgagatgcagaccagtctgagccccacggaggag
acggtgaagcccaaagttgctattttgcccttcagcgtggaggcactgatggctgacagg
aaacccagcagagaggtggcatccccggatgccccgtccgttcccgggacgtcccatgcg
ttgggaaaggtcgtaaggatgggctctttcggtagtctggattcttcagttcctgcttta
gccatgagctcctcgttttcggtggacgacatcatgaacatgccagaagacgtattgatc
aaacccgagagccccgacagtaatgacagaacttcatggttacagagtcctcgtttttct
cctactcctccacgaaggttgagtcctcccgcgtgtcccctgcgaaaacacaagacgaac
cgaaagccccggacccccttcactacgtcccagctgctggccctggagaggaagttccgc
cagaagcagtatctttccatcgccgagcgggcagagttctccagttccctcaacttgacg
gagacccaggtcaaaatctggtttcagaacaggagagcgaaagcaaagcggctgcaggag
gcagaacttgaaaaactgaaaatggcagctaaacctatgctgcctccagctttcgggatt
tcatttcctctcggtgcgcacgtgcctgcgtcctacgggtctcacccgttccagaggcac
tctctgccggtttcccctgtgggactgtacgccgctcacctcggatacagtatgtaccac
ctcgcttga
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