KEGG   Etheostoma cragini (Arkansas darter): 117944095
Entry
117944095         CDS       T07493                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117944095 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ecra01009]
    117944095 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecra03021]
    117944095 (ell2)
Protein phosphatases and associated proteins [BR:ecra01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117944095 (ell2)
Transcription machinery [BR:ecra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117944095 (ell2)
    Little elongation complex (LEC)
     117944095 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 117944095
NCBI-ProteinID: XP_034726543
LinkDB
Position
4:8486280..8503155
AA seq 683 aa
MLQPQRDDGGGLVKMAALSEDGRYGLNCGQQSADRVTVLHVKLTETALRAIESYQNCMNV
PSLQPTIQFKGLQGRIKIPKTDSSSDTSHNFDFYLSNVGKDNPQGSFECIHQYVSSSGAS
HLALLATVQDKVTVCATNDSYQVTRERMTQAVEDTRERGTKVIKPGGQYRGKQVHIRKPA
LSAPDVVPERKRSTPINPANTIRKCLSNNPVSQRPFRDRIIHLLALRSYKKLEVVARLQR
DGINQKNRNSLGTTLQQVANLNPKDNTYSLKDFIYRDVQRDWPGYSEDEKSQVDRILARK
LGLATETLSSSSSPKDSVPTSPQKRQSDFDFIDPLAPKKARISHLSNRGPAPSSSDRRED
EGSPSSRHSSLPSNVTSGPPTHLPISSHPPAPSHQQPSPASNSNSPSTPEGCGTQDLPMD
QSSSCRDPASSPFSSNRTLQDCYQHPVPVPRPAASPSPPPLPCTSLTVTSTVITSPSLSS
STNKKFKKKSKKHKDKDREREKGKRTEKGSRSPPSVAEQAEETRRAKKQRSAEEESRDLL
NKNPHKNQDSSEKEKPVQSTEFSSTIEMPDYVVKYMPMVSMDQRQSYKNDFNAEYEEYRL
LHARVESITRRFTQLDAKCRKLPPGTKEYQKVQEEVLKEYKKMKQHSPNYHEEKQRCEYL
HNKLAHIKQLIADFDQRRAQAWC
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgctccagcctcaaagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggagatacggattaaattgtggccaacagagcgcagatagagtcaccgtattacac
gtcaaattgacagagacagcgctgagagcaatagagagctaccaaaattgtatgaatgta
ccttctttgcagccaacaatacaattcaagggactccaagggcgcattaaaattcccaag
accgattcctcctcagacacctctcacaattttgatttctacctgtctaatgtgggcaag
gacaaccctcagggaagctttgagtgcatccatcagtatgtgtcgagctcaggggcctca
cacctggcattgttggcgactgtacaggacaaggtcacagtgtgtgccacaaatgactcc
taccaggtgacccgggaacgcatgacccaggccgtggaggacacacgtgaacgtgggacc
aaagtcattaagcctgggggccagtacagaggaaagcaagtccatatccgtaagccggcg
ctatcagccccagatgtggtcccagagcgcaagcgctccacaccaatcaacccagccaac
actattcgtaagtgcctttccaataaccctgtgtcccagcggccgttccgggaccgcatc
atccacctgctggcgctgagatcttacaagaagctggaagtggtcgcccgtttgcagcgg
gatggtataaaccagaagaacagaaactcattggggaccaccctgcaacaggtggcaaac
ctgaaccccaaagacaacacatattcattgaaggactttatttatcgtgatgtccagcga
gactggccaggctactctgaagatgaaaagtcccaggttgaccggatcctggctcgcaaa
ttggggcttgctactgagaccctctcatcaagcagttctcccaaagacagtgtccccaca
tccccccagaagcgccagtcagactttgacttcattgatcctttggcacccaagaaagcc
cgcatctcccacctcagcaatcgagggccagccccgtcttcgtctgaccgccgtgaggac
gagggcagccccagctctagacactcgtccctaccctccaatgtcacctcgggcccgccc
acccatctccccatctcgtcccacccccccgcaccctctcaccagcagcccagcccagcc
tccaactccaactcacccagcaccccagagggctgtggcacccaggacctgcctatggac
cagagttcctcctgcagagaccctgcatccagccccttctcctccaataggaccctacag
gactgctatcaacaccctgtccccgtcccaagaccagccgcctctcctagcccccctcct
cttccttgtacctcactcacagttacatccactgtcatcaccagcccctccttgtccagc
agcaccaacaagaagtttaaaaagaaatccaagaagcacaaagataaggatcgagagagg
gagaaagggaaacggacagaaaaaggtagcagaagtcctcctagtgtagcagaacaagct
gaagaaactcgtagagctaaaaagcagcgaagtgctgaggaagagagcagagaccttctc
aacaagaatccgcacaaaaatcaagactcatcagaaaaagagaagccagttcaatccact
gaattctcctccacaattgagatgcccgactatgtagtgaagtacatgcccatggtgtcc
atggaccagcggcaaagctacaagaatgacttcaatgcagagtatgaggagtatcgcctg
ctacatgcccgtgtggagagcatcacccgccgctttacccaactggatgccaagtgccgg
aagctgccacctggcaccaaagaataccagaaggtgcaagaagaagtcttgaaagagtac
aaaaagatgaaacaacacagccccaactaccatgaggagaaacagcgctgcgagtacctg
cacaacaagttggcccacatcaagcagctaatagctgattttgaccagcgcagagcccag
gcctggtgctga

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