Etheostoma cragini (Arkansas darter): 117944096
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Entry
117944096 CDS
T07493
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117944096
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117944096
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
117944096
Glycosyltransferases [BR:
ecra01003
]
Glycan extension
FORS blood group (Forssman antigen)
117944096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
SRTM1
Motif
Other DBs
NCBI-GeneID:
117944096
NCBI-ProteinID:
XP_034726544
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All DBs
Position
4:8478833..8482158
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AA seq
343 aa
AA seq
DB search
MALFPFFKKPAGPVRVTRKQLVLYCFLLSLFIYFLHGRKAIVSVESSHPIFHALGMDGGK
VMTDMTVIKATALQTPLETPWGAPLVWGDTRKSTWRRAEFAKQKTHTGLLAVVLGTYAQF
VQRFLSSAETHFLPGQMVTYYILTDNPRSLDPPIKLGPKRKLKVVPVAELPGWDQLARRR
MTLLADAIRNPIGSEVEYIFCADIDQEFVAPVGEEILGDLVATLHPELYGMPRNAFPYED
KEVSSACVEENEGDYYYTSELYGGLVSEMYRLARACSLLILQDQSNGLMARGLEESYLNR
YLIDHRPTCVLSPEYSWWGSDLAPDMLVQRLVSLGRNQKRKSM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgctattcccattcttcaagaagcccgcaggaccagtcagagtgaccagaaaacaa
ctggttctgtactgttttctcctgtctcttttcatatacttcctccatggacggaaagcc
attgtcagtgtggagtcatctcatcctatctttcatgccttgggaatggacgggggaaaa
gtaatgacagacatgacagtcatcaaggcaacagcactacaaactcctctggagacccca
tggggtgctcctttagtgtggggtgacacccgtaaatcaacttggcgcagggctgaattt
gcaaaacagaaaacccatacaggtctgctggccgtcgtgctgggaacttatgcccagttt
gttcaacggttcctctcatcagctgaaacccactttctccctggtcaaatggtcacctac
tacattcttacagacaatccccgctctctggatccccctatcaagttggggccaaaacga
aagctgaaggtggttcctgttgcagagctgcctggttgggaccaactggcccgtcgccgg
atgaccctgcttgctgatgctatcaggaacccaatcggcagcgaggttgaatacatcttc
tgtgctgacattgatcaggagtttgtggcccctgtgggagaggaaatcctaggagacttg
gtagccacattgcacccagagctctatggtatgccacgaaatgcatttccttacgaagat
aaggaggtctcatcagcttgtgtggaggagaatgaaggggactactactacacctctgaa
ttgtatggggggttggtttctgagatgtatagactggctcgggcctgttctttgctcatt
ttgcaggaccagtctaacgggttgatggccaggggcctcgaggagagctacctgaaccgc
tacttgattgaccacagaccaacttgtgtactgtccccagagtacagctggtggggctcg
gacctggctcctgatatgcttgtacagagattagtctctttgggaaggaaccagaaaaga
aaatcaatgtaa
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