Etheostoma cragini (Arkansas darter): 117944145
Help
Entry
117944145 CDS
T07493
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117944145 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944145 (stx16)
Membrane trafficking [BR:
ecra04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
117944145 (stx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
MCPsignal
Orf78
DUF2116
Prominin
DUF6548
Syntaxin_2
Fusion_gly
T3SS_needle_E
EVI2A
Motif
Other DBs
NCBI-GeneID:
117944145
NCBI-ProteinID:
XP_034726641
LinkDB
All DBs
Position
4:11824790..11832006
Genome browser
AA seq
321 aa
AA seq
DB search
MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRLSTRSNAAELDELADDRMALVSGISL
DPEAAIGVTKKLPPKWVEWVNEIQYEITRVRQKMKDLALLHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQSRCGHCTEQEEKLLRNVVSSIAQSLQDLSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEEDEDLAVYDKGFTDDQLMLVEQNTVMVEEREREIRQI
VQSIADLNEIFRDLAGMVVEQGTVLDRIDFNVEQSCVKTEEGMKQLQKAEQYQKKNRKML
VILILFIIVIVLIIILFGTKF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccactaggcgtctgaccgatgccttcttgttaatgcggaacaatgcaatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgtctgagtacacgtagcaat
gctgcggagcttgatgagttggctgatgatcgaatggctctggtgtcaggaattagtctg
gatcctgaagcggccattggagtcaccaagaaactgccccccaaatgggtagagtgggtt
aatgagatccagtacgaaatcacacgggttcggcagaaaatgaaagatctggccttactt
catgacaagcatatgaatcgacccacacttgatgacagtagtgaggaagagcatgccata
gaaatcactactcaggagataacacagatgtttcaccgttgccagcgagctgtgacaggt
ctgcagtctcgttgtggccactgtaccgagcaggaggagaagctactgcgaaacgtggtc
tcgtccatagcacagagcctgcaggatctgtccaccaatttcaggcacacacagtccggc
tatctaaaacgtatgaagaatcgtgaggagagatcaaagcacttttttgactctggaccc
ctaatggaagaggatgaagatttagctgtatatgacaaggggttcacagatgaccagtta
atgctggttgaacagaacacagttatggtggaagaacgagagagggaaatccgacaaata
gtgcagtccatcgcagatctgaatgagattttccgggacttggctggaatggtggtggaa
cagggcaccgttcttgacaggattgacttcaatgtggagcagtcttgtgtgaaaacagaa
gaaggaatgaaacagttacaaaaggcggaacagtatcagaagaagaacagaaagatgctg
gtcattttgatcctcttcatcatagtcattgttctaattattattctttttggaacaaag
ttttaa
DBGET
integrated database retrieval system
