KEGG   Etheostoma cragini (Arkansas darter): 117944209
Entry
117944209         CDS       T07493                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecra03019]
    117944209
   04121 Ubiquitin system [BR:ecra04121]
    117944209
Enzymes [BR:ecra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117944209
Messenger RNA biogenesis [BR:ecra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117944209
Ubiquitin system [BR:ecra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117944209
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 zf-C3HC4 zf-RING_2 Prok-RING_4 KH_DEAH11_2nd
Other DBs
NCBI-GeneID: 117944209
NCBI-ProteinID: XP_034726687
LinkDB
Position
5:10299322..10304911
AA seq 680 aa
MPSSTSLLEADEGESEVPPPLVHAFAGMGLEEHHGTQSQTHEHVDESLHYHHHNHQLPPI
SHFNLLGTVLDLKPLHRPPPGDELNMTVAPEEKEPEVGGAADSSMLAQARHHQHLPSRSA
GSVIPSGMEPPHVETVLLYNGDEWDDTGVGGSALPLAGGMAMLPPGVFGESGYEAESSLL
ARRKSVNTTECVAVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEQPVFVVTGRKE
DVVMAKREILSAAEHFSLIRASRNKTSPVSVATGPGTPSLPGQTTIQVRVPYRVVGLVVG
PKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRARDEIEAHIALRTGTCGSIEA
PGVDNNDFQFNGTDVSFENSATPAGLGEAGWLNAGASPPSGGLLPMSINGTQRINSNINS
GVRMSSTYRNDSSSSLGSGSSSVDSVHGGGNGNRVADLSPTCQFNANANNNNSNGSSTSF
WFGDSLLPVASEDVVSLGGGGSTSGFDPLTISTAQASHPAAQPQIWSPFVDHQPPQVFDA
RQSQTSQPGTPRLSPTFSGTEALEHPQAQRVHRGPFGSAGALDAHRFPSYSSAFSSSSES
TASSSSPPESSLSYRPGLGAAGRGQEICIHCMDNQVIAALVPCGHNLFCLDCATHICQGP
DAACPVCLSSVTQAIQLRNM
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgccgagtagcacgtctttgctggaggccgacgagggagagtccgaggtcccacctccg
ctagtgcacgctttcgccggtatgggccttgaggagcaccatggcacccaaagccagacc
cacgaacatgtagatgagagcctccactatcaccaccacaaccaccagcttcccccaatt
tctcatttcaacctcctcggtacggtcctagacttgaagcctctgcatcggccgccccct
ggagatgagttgaacatgacggttgcgcccgaggaaaaggagccagaagttggaggcgcc
gcagactcctcgatgctagcgcaggcccgccaccaccaacacctcccttcccggtcagcc
ggctccgtgattccatccgggatggagccgccacatgttgagacggtcttgttgtacaac
ggagacgagtgggatgatactggagttggcggcagcgccctaccactggctggcggcatg
gcgatgctgccgcccggcgtgttcggggagtcgggctacgaggccgagtcttcgctgttg
gctaggcgaaagagcgtcaacacgaccgagtgtgtggcggtgccgagctctgagcacgtc
gctgagattgtgggcaggcagggctgtaagattaaggcacttagagccaagaccaacacc
tacattaagacaccagtgaggggagagcagcctgtctttgttgtgacagggcgcaaggaa
gatgtggtcatggctaagagggagattctgtctgcagcggagcacttctccctcatccga
gcctctcgaaacaagacgagccctgtttctgttgcaaccggccctgggaccccctctcta
cctggacagactaccattcaggtgcgggtaccatatcgtgttgttgggctggttgtgggt
cccaaaggggcaaccatcaaacgtattcagcaacagacccacacctacattgtgacgccg
agtcgggacaaagagcctgtgttcgaggtcaccgggatgcccgagaatgtggaccgggca
agggatgagatagaggcgcacattgccctccgcacaggaacctgcggaagcattgaggct
cctggtgtagacaacaatgactttcaattcaatgggacagacgtcagctttgagaattct
gccacaccagctgggttgggggaggctgggtggcttaatgcaggcgcatcacccccgagt
ggtggcttgctgccaatgagcattaacggtactcagcgaatcaatagcaatattaacagt
ggtgtcagaatgtcttccacctaccgcaatgacagctccagttccctgggcagcggctcc
agctcagttgattctgtccacggcggcggtaatgggaaccgtgttgcagatttaagcccg
acctgtcagtttaatgccaatgcaaacaacaacaacagtaatggcagcagtacaagtttc
tggtttggcgatagccttctccctgtggcgtctgaggacgtagtcagcctgggaggcgga
ggctctacctcaggatttgacccattaaccatctccactgcccaagcctctcaccctgct
gcacagccacaaatctggagcccctttgtggaccaccaacccccccaagtctttgatgct
cgtcaatctcagaccagtcagcctgggacgccccgactctctccaaccttctcagggaca
gaagccttggagcaccctcaggcccagcgagttcaccgagggccttttggctcggccggg
gccctcgatgcccacaggtttccctcttacagctcggccttctcctcttctagtgaaagc
accgcctcctcttcctccccacctgaatcctccctctcctatcggccggggcttggagca
gcagggagaggacaggagatctgcatccactgtatggataaccaggtgatcgctgccttg
gttccctgcggccataacctcttctgtctagattgtgccacccatatatgccaaggtcca
gacgctgcgtgccctgtgtgtctgtcctcggtgacacaggccattcagctccgcaacatg
tga

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